Legionella pneumophila Paris (serogroup 1): lpp2294
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Entry
lpp2294 CDS
T00209
Symbol
deaD
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Pathway
lpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpp2294 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpp03019
]
lpp2294 (deaD)
03009 Ribosome biogenesis [BR:
lpp03009
]
lpp2294 (deaD)
Enzymes [BR:
lpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lpp2294 (deaD)
Messenger RNA biogenesis [BR:
lpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lpp2294 (deaD)
Ribosome biogenesis [BR:
lpp03009
]
Prokaryotic type
rRNA helicases
lpp2294 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Helicase_C_2
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAH13447
Pasteur:
lpp2294
LinkDB
All DBs
Position
complement(2634322..2636091)
Genome browser
AA seq
589 aa
AA seq
DB search
MNQEISNFSTFNFSSALNKALEDMKFITPSPIQAQTIPLILEGRDAIALAQTGTGKTAAF
ALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK
QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK
KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL
EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV
ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI
ERHTRQRIEKVQVPNDHMIQMARQQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVD
VAAALALLLHKDMPWRKELNMPKAASAFKEERARVGEKGLDLRGRFKEDRKSSFADRKGA
RGSKKDFAKDFSNERKKFNDGRKAVNQESVAQDLFRIDVGKIHGVKPGNIVGAIANEAGL
QSRYITGLKIHEDHSTVRLPKGMPKEVMKDLTKAWVCGRQLNLTLIGSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaatatcaaacttctctacttttaatttttctagtgctttaaataaagcg
ttagaagatatgaagtttattacgccatcgcctatccaggctcaaaccattcctttgata
ttggaaggtcgtgatgccattgctcttgcgcaaactggtacaggtaaaacagcagctttt
gcattaccaattttgcaaaatctgtctcctgagatatctaccactcaggctttgatttta
gcccctactcgtgaattggcaatccaggttgcagagcagtttgaattattaagcaagtac
caacgcaatgtgacgattgctgttctttgcggtgggcaagaatatggtcgtcaattaaaa
caattgcgtagtggtgcgcaagtggttgttggaacgccaggacgtattctggaccatatc
gataaaggcactttgctcttaaataatctgaagacatttattcttgacgaagcagatgaa
atgttgcgtatgggtttcatcgaagatgtagaaaccattttagaaaaactgcctgaaaaa
aagcaaatggcattgttttcagcaaccatgccctatcgaattcgtcaaatagccaatact
tatttgaatgaccctgcctcaattgaaatccgtatggaaactgcgacggtcaagtctatt
gagcaacggtttttatttgcttccgttcatcaaaaaccggatgcgttaatccgggtcttg
gaagtggaggattatcaaggggttatcgtttttgtacgcactaaaagcagtactgaggaa
gtagcagaactattgcaacaacatggattaagagcaatggcaattcatggtgatattact
cagtctttgcgtgagcggattattgcccaatttaaacaaggagcgattgatattctggtg
gcgacggatgtcgctgcaagaggtttggatgtcgagcgagttactcatgtgattaattat
gatatgccacatgacaatgaaacttatgttcacagaattggcagaacagggagggctggc
cgttctggtgttacgattttatttgtaactcccaaggagtcgcgtttaatttccagcatt
gaacgccataccaggcaacgaattgagaaagttcaagttcctaatgaccatatgatacag
atggctcgtcaacaaagattcatgtctaacattactactcgactgaatcatgagcatgtg
tattcctacaaaaggattgtggaagaatacattaaagagcatgacgtatcagcagtagat
gttgcggctgctcttgctttattgctgcataaagatatgccttggagaaaagaattaaat
atgcctaaagcagcttcagcattcaaagaagaaagagctcgggtaggagaaaaaggattg
gatttacgtggtcgatttaaggaagatagaaaaagctcttttgctgatcggaaaggtgcg
cgaggaagcaagaaagattttgccaaagatttttctaatgaaaggaaaaaatttaatgat
ggcaggaaggccgttaatcaagaatcagtagcccaggatttatttcgcattgatgtaggc
aaaattcatggagtcaaacctggcaacatagtaggggctattgctaatgaggctggcttg
caaagccgatatattactgggcttaaaattcatgaagatcactccactgttcgtttacca
aaaggtatgcctaaagaagtgatgaaggacttaaccaaggcttgggtttgcggccgccaa
ctcaatttaacattaattggtagtgcctga
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integrated database retrieval system
