Legionella pneumophila Paris (serogroup 1): lpp2310
Help
Entry
lpp2310 CDS
T00209
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD (Sigma-70)
KO
K03086
RNA polymerase primary sigma factor
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Pathway
lpp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
lpp2310 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpp03021
]
lpp2310 (rpoD)
Transcription machinery [BR:
lpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
lpp2310 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
HTH_11
HEF_HK
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CAH13463
Pasteur:
lpp2310
LinkDB
All DBs
Position
2652058..2653923
Genome browser
AA seq
621 aa
AA seq
DB search
MTMNDQDQQSSQITKVISLGKEQGYLTYSQINDLLPNIVDTEHFDVIISMLEGMNIKVFE
LPPSEDELALLLNTEEVPDIEEAAMVLASVDKETGRTTDPVRMYMREMGTVELLTREGEI
RIAKRIEEGIYQVLKSLAHYPETVQLVLEDYDRFLAEEIRLNEIISGFADVDEEIAPATN
IGSMLDEEQQEEILLDVDEEDEDGEGGISDVDDGPNPEQAKIYFDELREAFEKAMKALKE
HGRTNKKTVELLDSMSESFLKLKLTSRQVDKLTRHFRQLRNHIREFERSIMRLCIEKARI
PRKLFIDTFPGQETDLSWLETIISKHAKKLDLDRIEENREEILRLQSKLASFEIEYGLTI
SEIKDINRKMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQETG
REATPEELAEKMELSEDKIRKVLKIAKEPISMETPVGDDDDSHLGDFIEDNNIESPIDMA
TAEGLREATLEILETLTPREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEKLRSFLEGDEG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaatgaccaagatcagcaaagctcacaaattacgaaagtcattagcctgggt
aaagagcaaggttatttgacttacagtcaaattaatgacttattacctaatattgtggat
acagagcattttgatgtaatcattagcatgctggaaggcatgaacatcaaagtttttgag
cttccacccagtgaagatgaacttgcgctcttattaaatactgaggaagtcccagatatt
gaagaagcagccatggtactcgcctctgtggataaagaaacaggcagaacaactgacccg
gttcgtatgtatatgcgcgaaatgggcacagtagaactgctgactcgtgaaggtgaaatc
cgcattgccaaacgcattgaagaaggaatttaccaggttctaaaatccctggcgcattat
ccggaaacagtgcaactggttcttgaagactatgatcgtttccttgcggaagaaattcgc
ctcaatgaaatcattagtggttttgcggatgttgatgaagaaatagcacctgctactaac
attggttccatgctggatgaagagcaacaggaagaaatacttcttgatgtcgatgaggaa
gatgaagacggcgaaggtggtatatctgatgtggatgatggacccaatcctgagcaagca
aaaatttactttgatgagctgcgtgaggcctttgaaaaggcaatgaaagccctcaaagag
catggccgtacgaataaaaaaacggttgagttgctcgattccatgtcggaatcttttttg
aaacttaaattgacttccagacaagttgataaactaactcgtcattttcgccaattgcga
aatcatatccgtgaatttgagagaagcataatgcgtctttgtatcgaaaaagcacgcatc
cccagaaaattgtttatagataccttcccaggccaggaaacagatctaagctggttagaa
accattatcagcaaacatgccaaaaaacttgatcttgatcgtatagaagaaaatcgggaa
gaaatactacgcttacaatccaagctggcctcttttgaaatcgaatatggtttaaccatt
agtgaaatcaaagacattaaccgcaagatgtctattggcgaagccaaagcaaggcgtgct
aaaaaagaaatggtcgaggctaacttgcgtctcgtgatttccatcgccaaaaaatacacc
aaccgcggcttgcagtttcttgatttgatccaggaaggcaacattggcctgatgaaagca
gtcgataaattcgaataccgccgtggctataagttttctacctatgcgacctggtggatt
agacaagcgattacacgatccatagccgatcaggcgcggactattcgtattccagtccat
atgattgaaaccatcaataagctcaatcgtatttctcgccaaattttgcaagaaactggc
agggaagcgacaccggaagaattggccgaaaaaatggagctaagtgaagataaaattcgc
aaagttctaaagatagccaaagagcctatttccatggaaacccctgtcggtgatgatgac
gactctcatctgggtgattttattgaagacaacaacattgaatcgccaatcgatatggct
acagcggaaggtttaagagaagccactttagaaatactggaaaccctgaccccacgagaa
gccaaggttctgcgtatgcgttttggtatcgaaatgaatacagaccataccctggaagaa
gttggtaaacaatttgacgtaacccgcgaacgtattcgccaaatcgaagcaaaagcacta
cgcaaattgcgccatccttcacgttcagaaaagctaagaagcttccttgaaggggatgaa
ggttaa
DBGET
integrated database retrieval system
