Lacticaseibacillus paracasei N1115: AF91_05270
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Entry
AF91_05270 CDS
T03050
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lpq
Lacticaseibacillus paracasei N1115
Brite
KEGG Orthology (KO) [BR:
lpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpq03019
]
AF91_05270
Messenger RNA biogenesis [BR:
lpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AF91_05270
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AHJ32607
UniProt:
A0A806LGY3
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Position
1050148..1051116
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AA seq
322 aa
AA seq
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MVKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDASDNDIAQ
FKAGEVVQLSGKRELYQGNPQIKIFSLRLATQEEGNDPKAFVERAPEAPSDMEEELNSYI
FEITNANWNRIVRKLINDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKSVVQQYSS
LNKSLLYAGAILHDLGKTIELSGPISTDYTVEGNLIGHIVLIDEQIVLAAQQLKIDINAE
DMLLLRHVVLAHHGLLEYGSPVRPELLEAQVLHDLDELDASINMMTTAYQHVDPGTFTER
LFGMDNRRFYRPKNGQTFPDPH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaacggcttttcgattatcataatgaagaagatgttcggcttcctgtgctgatt
aaatcagctgaagtgcgtgtcgcaaagaatggcaaaaaatttattgcgatgatttttcaa
gacaattcaggacatatttcaggtaagttctgggatgctagcgacaatgacattgctcag
tttaaggctggcgaagtcgtccaattgtcgggtaagcgtgaattatatcaaggcaatccg
caaattaagattttttcattgcggttggcaacccaagaagaaggcaatgatcctaaagcc
tttgttgagcgggcgccagaagcacccagtgatatggaagaggaactgaacagttacatc
ttcgaaatcaccaatgctaactggaatcgaattgtccgtaaactgatcaatgatcacaag
aaggcatttttcagttatccggccgccaagtcaaatcaccatgcttttgctggtggtctc
gcttttcatacgctaagcatcttgcgacttgctaaaagtgtcgttcaacagtattcgagc
ttgaacaaaagcttgctatatgcaggcgcaattttacatgatctcggtaagaccattgag
ttaagcgggccaatctcaactgattacacggttgaaggcaacttgattggtcacatcgtt
ctcattgacgaacagattgtcttagcagcacaacaacttaaaattgatatcaacgctgaa
gatatgctcttactacgtcatgtcgtgcttgcacatcacggattgcttgaatacggctcg
ccggtgcggccagagctgcttgaagcgcaagtgttgcatgatttagacgaattggacgca
tcaatcaatatgatgacaaccgcctaccaacatgttgatcctggtaccttcacagaacga
cttttcggtatggacaatcgtcgcttctatcgacctaaaaatggtcaaacttttccggat
ccgcactag
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