KEGG   Lacticaseibacillus paracasei N1115: AF91_06370
Entry
AF91_06370        CDS       T03050                                 
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
lpq  Lacticaseibacillus paracasei N1115
Pathway
lpq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lpq00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AF91_06370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpq03021]
    AF91_06370
Transcription machinery [BR:lpq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AF91_06370
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 Myo5a zf_MP81 DUF6753 DUF6465
Other DBs
NCBI-ProteinID: AHJ32820
UniProt: A0A806L6D4
LinkDB
Position
1261696..1262964
AA seq 422 aa
MADKKTATEVDKTTKKTTAKPAAKTAAKTTAVKAAAKKTTAKKTTVKKTTASSKRTTKTT
TKAFDDAVKAVIKDYKKKKQITEDDLTDKLVKPFELKSGAIDDLMQKIEDNGIAIVDENG
EPAAISLKKQKKVSKKEMSDMSAPSGVKINDPVRMYLKEIGRVSLLTADEEVALALKIEQ
GDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTY
ATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIGAEMDMP
TEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEDHASYELLKEQLESVLDT
LTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDF
LE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctgataaaaaaacagcaactgaagtagacaagaccacaaagaagacaacggctaag
ccagcagcaaaaactgcggctaagacaactgctgtcaaggcggcggcaaaaaagaccacc
gcgaaaaaaactacggtcaagaagactaccgctagcagcaaacgcacgaccaaaacgaca
acgaaagcattcgacgatgctgtcaaggccgtgattaaagattacaagaagaagaaacaa
attactgaagatgacctgaccgacaagttggttaagccgtttgagctcaagagtggtgcc
attgacgatctgatgcaaaagatcgaggataatgggattgctattgttgatgaaaatggc
gagccagcagcgattagcttgaagaagcaaaagaaggtttccaagaaggaaatgagtgac
atgtccgcaccttcaggggtcaaaatcaatgaccctgtacggatgtacctgaaggaaatc
ggccgagtttccttgctgacagctgatgaagaagttgcccttgccttgaagattgaacaa
ggtgatcaagaagctaagcaacgtttggctgaagctaacttgcgactggttgtttccatc
gctaagcgttatgttggtcgcggcatgcaattcctggatctgattcaggaagggaacatg
gggctgatgaaggcggtcgagaaattcgattaccggaaaggctttaagttctcaacgtat
gccacctggtggattcggcaggctattacccgtgccatcgctgaccaagcccggacaatt
cggattccagtgcatatggttgaaaccattaacaaattgattcggattcaacggcaactg
cttcaagaccttggtcgtgaaccaacgcctgaagaaatcggcgcggaaatggacatgcca
actgaaaaggttcgcgaaatcctgaagattgcgcaagaacctgtttccttggaaacgcca
attggtgaagaggatgattcacatcttggcgacttcattgaagaccaagacgccaccagt
cctgaagaccatgcttcctatgaactgctcaaagaacagttggaaagtgtgctggatacc
ttaacggatcgtgaagaaaatgttttgcggttgcgttttggactcgatgatggccggacc
cgtaccttggaagaggtcggcaaggtctttggcgtgacccgcgagcgaattcgtcaaatc
gaagctaaggcattgcggaagctccgccacccaagccgttccaagcaacttaaggatttt
cttgagtaa

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