Lacticaseibacillus paracasei N1115: AF91_06875
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Entry
AF91_06875 CDS
T03050
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lpq
Lacticaseibacillus paracasei N1115
Brite
KEGG Orthology (KO) [BR:
lpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpq03032
]
AF91_06875
03400 DNA repair and recombination proteins [BR:
lpq03400
]
AF91_06875
Enzymes [BR:
lpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AF91_06875
DNA replication proteins [BR:
lpq03032
]
Prokaryotic type
DNA Topoisomerases
AF91_06875
DNA repair and recombination proteins [BR:
lpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AF91_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
AHJ32917
UniProt:
A0A806LHW0
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All DBs
Position
complement(1375425..1377509)
Genome browser
AA seq
694 aa
AA seq
DB search
MADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVDNDYEPKYISIRG
KGDVIKSLKKDAKKASKIYLAADPDREGEAIAWHVSHILGLDPKAKNRVVFNEITKDAVK
NAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRE
NEIKNFTPEEYWSLDAEFQKGRSKKFSASFYGLKNKKQALKNNEAVQKILGQVDKTKPFA
VTNVVKKERKRFPSPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLI
TYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTP
DSLTAVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLDQNGVTFRANGSQTKFEGFTK
LYVSSRDSDQKDNILPPLAVGDDVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPS
TYAPTIETIQKRYYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANVESELDGIET
GEADWVKVIDQFYKPFEKEVAHAETGIAKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYA
CSRFPDCRNTKAIVKEIGVVCPKCHIGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGR
DCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaagttagtcattgttgaatcgccagccaaagccaagactattgaaaag
tatcttggccgaacctataaagttgttgcaagtttggggcacattcgcgatctacctaag
agtcagatgggggtcgatgtcgataacgactacgagccaaagtacatttcgattcgcggc
aaaggcgatgtgattaaatcccttaaaaaagatgctaaaaaagctagcaagatttatctc
gcagccgatccggatcgtgaaggagaagccattgcatggcatgtcagtcacattttaggt
ttggatccaaaagccaaaaatcgcgtcgtttttaacgaaattacgaaagatgccgttaaa
aatgcgttcaaaacccctcgtggcattgatatggatcttgtagatgcccagcaggcacgg
cggattttggatcgactggtaggctattccatcagtcctttattatggaagaaagttaaa
aagggcctgagtgctggccgcgttcaaagtgttgcgctaaagctgattattgatcgcgaa
aatgaaatcaaaaacttcacgccagaagaatactggtcattagacgctgagttccaaaag
ggccgtagtaaaaagttcagtgctagtttctatggcctgaagaataaaaagcaggcttta
aagaacaacgaggccgttcaaaagattttgggtcaagtggacaaaactaagccgtttgct
gtgacgaatgttgttaaaaaagaacgcaaacgcttcccatccccgccattcacaaccagt
accttgcagcaggaagctaaccgtaagttgggattccgcacccgaaagaccatgatgttg
gcccagcaactgtatgaaggaattaacttaggtggtaagttaggcaccgttgggctgatc
acgtacatgcggaccgactcgactcgcgtgtcaaatgttgccaaaactgaaaccagccat
tacctgcatgagaaatacggcgaagcttatgctgctgtcaaaattcgccaaggtaaactg
caggaaggggcacaagatgcccacgaagccattcggccaaccagcacattacggacaccg
gatagtttgacggcagttctggacaaagatcagatgaaactttatcggctgatctggagt
cggtttgttgccagtgaaatgaccccggcgattattgacactgtggccgtgacgttagac
caaaacggtgtgactttccgcgccaacggtagtcagactaagtttgaagggtttaccaag
ttgtatgtctcatcacgtgacagcgatcaaaaggacaatattttgccaccgcttgcagtt
ggtgatgatgtcaaaatgttgaagaccgatccggctcaacactttacacagccaccagcc
cgttactcggaagcaaaccttgtcaaagcgcttgaagaaaatggcgttggtcgtccgtca
acttatgcgccaactatcgaaaccattcagaaacgttactacgtgaaactgaatgctcgc
cggtttgaaccgactgaattaggtgagatcgtcaacagcttgatcgttgaattcttcccg
gacatcgtgaatatcaaatttacggcgaacgtcgaatctgaacttgatgggattgaaacc
ggcgaggctgattgggttaaggtgattgatcagttctataagccatttgaaaaagaagtg
gctcacgccgaaactgggatcgcgaagattcaaatcaaagacgaaccagccggcttcaac
tgtgacatctgcggtgcgccgatggttatcaaaatgggtcgttatggtaagttttacgcc
tgttcccgattcccggattgccgcaacaccaaggccattgtcaaagagatcggggttgtc
tgcccgaaatgtcatatcggtcaagttgttgaacgtaagagcaagcgtaaccgcgtcttc
tatggttgctcgcgttatccagactgcgactttgtctcatgggacaaaccagtcggccgc
gattgcccggtctgcggacatttcttagttgagaaaaagagcaaagctggcacccaagtt
gtctgcccaaataacgattataaagaagccttacaaaaagcataa
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