Lacticaseibacillus paracasei N1115: AF91_13080
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Entry
AF91_13080 CDS
T03050
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lpq
Lacticaseibacillus paracasei N1115
Pathway
lpq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AF91_13080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpq03400
]
AF91_13080
DNA repair and recombination proteins [BR:
lpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AF91_13080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AF91_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_21
AAA_16
RsgA_GTPase
AAA_23
AAA_25
nSTAND3
Viral_helicase1
Zn_ribbon_TFIIB
ATPase
Motif
Other DBs
NCBI-ProteinID:
AHJ34032
UniProt:
A0A806LIK1
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All DBs
Position
2552604..2555132
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AA seq
842 aa
AA seq
DB search
MAIPDHISVRGAYVNNLKHLNVDIPLNKLVAITGRSGSGKSSLAMGVLYAEGMRRYMSAL
STYTRRRLGQTSPAAADSVRHIPSAIALRQRPTVPGIRSTVGTATEALNVIRLMFSRLGS
PVCPNGHRVSPTLDIAKAMDLPNDGESGMGMITCPTCGVRFMAFAAEDFAFNSTGACPTC
GGTGQARTLAANRLIPDQTLTIRQGAVASWRLPGRNFMPFVAQAIGIDIDTPFQDLPKDQ
QEQVWHGERKKYAINIPSKTGKIFHMDHAQYENAFNAVEDSLATTKNERAIQRLNRFYEF
GICPTCHGSRFAPKLLSQHLVDQNIAQVSDMTLTQLAAFIPEIYHWLPADMQSLAHDIIQ
ELTQLLKPIMDLGLSYLTLSRAAASLSTGELQRIQLSRTLRTETTGVLYVLDEPSIGLHA
ANVSGLLEVMHGLVNQGNSLVVVDHNTAIIEAADQVIEIGPGAGVAGGRLIDQGSPEAIS
HDTHSLIAPFLTGAASLIVRPQAGEQEIKQTKQLQLTITDRFNLHDLHVHFPVNCFSVVS
GFSGAGKSTLIFDALVPALSATADQPAPAFVRDLDRGGLRHVVAIDATPVGKNVRSTVAT
YTDILDHLRHLFASLPDAKAKHYTSSHFSYNVKAGACPTCGGTGVINLDIQYLPDMQQTC
PTCHGRRYNPEVLKIKWQQHSIADLLDLDVDSALTVLKDEPAISHTLQTLHDMGLGYLHL
GESTPTLSGGEAQRLKLVAHMGRSQKDTLFVFDEPSVGLHPLDVQTLIAVFQRLLKTGAT
VIAIEHDLDVIANADYVLDLGPKGGAEGGRIMAADTPQAIAKQGKGETAPYLAAHLAAFH
VK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcccgatcatatcagtgttcgcggcgcttacgttaacaacttgaagcatctc
aatgttgatattccgcttaacaaactggtggcgatcactggtcggtctggttccggtaaa
agttcattagccatgggcgtgttatacgctgaaggtatgcgccgctacatgagtgctttg
tccacctacacccgccggcgccttggccaaacaagtcctgctgctgctgactcagtacgc
cacattcctagtgccatcgctttgcggcagcggccaaccgttccaggcatccgctcaact
gtcggtacggccacagaagcgctcaacgtcattcgcctcatgttttcccgtctcggctcg
ccggtttgtcctaatggtcaccgcgtgtcgccaactctcgatattgccaaggcaatggat
ctgcccaatgacggtgaaagtggtatgggcatgatcacttgtccgacctgtggcgtccgt
ttcatggcttttgctgctgaagatttcgccttcaattcaactggcgcctgcccgacatgc
ggcggtactggtcaagcgcgcacactggccgccaaccggctcatccctgatcaaacactg
acaatccgtcaaggtgccgtggcctcgtggcgcttgcccggtcgcaattttatgcctttt
gtcgcacaagcaatcggcattgatattgatacgcctttccaggacctgccaaaagatcag
caagaacaggtttggcacggtgaacgtaaaaaatacgccatcaatatccccagcaaaacc
ggcaaaatttttcatatggaccatgcacagtacgagaatgccttcaatgcggtcgaagat
tctttagcgacgaccaaaaatgaacgcgccattcagcggctgaatcgcttctatgagttt
ggcatctgcccgacctgccatggcagccgatttgccccgaaattattgagccagcaccta
gtggatcaaaacattgctcaggttagtgatatgactttaacgcaattagccgcgttcatt
cccgaaatctatcactggttgccagcagatatgcagtcactggcgcacgatattatccaa
gaactgacgcaattgcttaagcccatcatggaccttggcctcagttacctgaccctgagt
cgagccgcggcttccttatcgactggtgaattgcaacgcattcagctcagtcgcacgctt
cggactgaaacgaccggcgtcctttacgtccttgatgaaccgtccatcggcctgcatgct
gcaaacgtttctggattgctagaagtcatgcacggtttggtcaatcaaggcaactcgctg
gtcgttgtggatcacaacaccgccatcattgaggcagccgatcaagtgattgagattggt
cccggtgcaggcgttgctggcggccgactcattgatcaaggcagccctgaagcgatcagc
catgatacccattcgttgattgcaccttttttaaccggagcggcttccttgattgttcgc
ccgcaagctggtgaacaagaaattaagcaaaccaaacaactgcaattaaccataactgat
cgatttaaccttcatgacctgcatgtccattttccagttaactgcttctcagtggtatcc
ggcttttctggtgctggcaagtcaactttgatttttgacgccctagtaccagcgctgtca
gcaactgctgaccaaccagctccagcatttgttcgtgatcttgaccgcggcggcctgcgc
catgtagttgcgattgatgccacgccggtcggtaaaaatgtccgctcaaccgtcgccacc
tacacagacattctcgaccatctgcgacaccttttcgccagtttgcctgatgccaaagcc
aagcactatacgagtagccatttctcttacaacgtcaaagccggcgcgtgcccgacatgc
ggcggtaccggcgtcattaacttagatatccagtatctgcctgacatgcagcaaacttgc
ccgacttgtcacggccgtcgctacaaccccgaggttctgaaaatcaaatggcagcagcac
agcatcgccgacttgctagatctggacgtggactccgccttgaccgttctgaaagacgag
cccgctatttctcacacattgcaaaccctgcatgacatgggcctcggttatttgcattta
ggtgaaagtaccccgacgctgtctggcggtgaagcgcagcgcctgaagctagttgcccac
atgggacgctcccaaaaggacacgctttttgtcttcgatgaaccatcggtaggtctacac
cccttggatgttcaaaccttgatcgctgtttttcaacggttgctcaaaaccggtgcaacg
gttattgccatcgaacacgatttagacgtcatcgctaacgctgattatgtcttggatctc
ggaccaaaaggcggtgcagaaggtggccgcatcatggctgctgacacaccgcaagcaatc
gccaaacaagggaaaggtgaaactgccccttacttggcggcccatctggcggcctttcac
gttaagtag
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