Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg0487
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Entry
LBP_cg0487 CDS
T02670
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpr03400
]
LBP_cg0487
DNA repair and recombination proteins [BR:
lpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBP_cg0487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
ABC_tran
Lon_C
AAA_22
AAA_16
AAA_24
SLFN-g3_helicase
AAA_30
nSTAND3
RecA
NTPase_1
AAA_14
DUF7125
Rad51
AAA
NPHP3_N
KdpD
AAA_5
AAA_19
DZR
NACHT
ATPase_2
DUF7129
Zeta_toxin
HypA
KTI12
Motif
Other DBs
NCBI-ProteinID:
AGL63233
LinkDB
All DBs
Position
516774..518159
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AA seq
461 aa
AA seq
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MYVAKAKTQFVCSNCGYSTPRYLGRCPNCGEWNTLTEEHFDTKPDRKSRVSFAGKSAKPQ
RLKEVSLTKTPRVKTKLKEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSGQLAETGG
SVLYVTGEESASQVKMRADRLAVSSEDFYLYPETDMSNIRSTIESTHPEFVVIDSVQTMQ
EPDMDSAIGSVSQIREITAELLQIAKTNGITIFIVGHVTKGGAIAGPKILEHMVDTVLYF
EGDLHHTYRILRAVKNRFGSTNELGIFEMRTGGLYEVANPSEIFLEERLKDATGSAIVVS
MEGTRPILVEVQALVTPTVFGNAKRTASGLDHNRVSLIMAVLEKRASLMLQNQDAYLKAA
GGVKLDEPAIDLAIAVSVASSYRDQQTRPSDCFVGEVGLTGEIRRVNRIESRVGEAAKLG
FKRIFIPKNNLQGWDIPTGIEVIGVATLKEALQLALQQPNY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtggcaaaagcaaaaactcagtttgtttgttctaactgtggttattcaacaccg
cgatatttaggacggtgtccgaactgtggtgaatggaatacactaactgaagaacatttt
gatacaaaaccggaccgcaagtcgcgggtgagctttgcgggtaagtcggctaagccacaa
cgactcaaagaagtgtcgctgactaagacaccgcgtgtcaagactaagctgaaagagttc
aaccgggtcttaggtggcggtgttgtgccaggttcactagttttgatcggtggtgatcca
ggtattggtaagtcaacgttactactgcaagtttcggggcaattggccgagacgggtggt
tccgtactatacgtgactggtgaagaaagtgcctcccaagtgaagatgcgggcggaccgg
ctggctgttagcagtgaagacttttatctttatcctgagactgatatgtcgaatattcgt
tcaacgattgaatcgacgcatccagaatttgtggtcattgattcggtacaaacgatgcaa
gaacctgatatggactctgcgattggttcagtatcacaaatccgtgaaattacggctgaa
ctactgcaaattgcgaagactaacggcattaccatttttattgtgggccatgtgactaag
ggtggtgccattgcggggcctaagatcttagaacatatggttgataccgttttgtacttt
gaaggtgatttacatcatacgtaccgcattttacgggcagtcaagaatcgattcgggtca
acgaatgaactgggaatatttgagatgcggacgggcggtttgtatgaagtggccaatccg
tcagagatcttcttggaagaacgtctgaaggatgctacgggttccgccatcgttgtttca
atggaaggaacacgaccaatcttagtagaagttcaagcgctggtaacgccaacggtcttt
ggtaatgcgaagcggaccgcaagtggcttggatcataatcgagtctccttgattatggca
gtgttggaaaaacgggcgagtctaatgcttcagaaccaggacgcgtatttgaaagcggcc
ggtggcgttaagttagatgaaccggcgattgacttagctattgcggtcagtgtggcttct
agttatcgtgaccagcagactcgtccgagtgactgttttgttggtgaagtcggtttgact
ggtgagattcggcgggtcaaccggattgaatcacgagttggtgaggcggctaagctaggt
tttaaacgtatctttattcctaagaataatctgcaaggttgggatatcccaactggaatc
gaagtaattggagttgccacgctaaaagaagcgctccaattagcattacaacaaccaaat
tattaa
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