Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg0512
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Entry
LBP_cg0512 CDS
T02670
Name
(GenBank) DNA-directed DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03030
DNA replication
lpr03430
Mismatch repair
lpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBP_cg0512
03430 Mismatch repair
LBP_cg0512
03440 Homologous recombination
LBP_cg0512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpr03032
]
LBP_cg0512
03400 DNA repair and recombination proteins [BR:
lpr03400
]
LBP_cg0512
Enzymes [BR:
lpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBP_cg0512
DNA replication proteins [BR:
lpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBP_cg0512
DNA repair and recombination proteins [BR:
lpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBP_cg0512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_22
AAA_5
AAA_19
AAA_16
TIP49
AAA_7
AAA_assoc_2
AAA_14
DnaX_C
Sigma54_activat
AAA_24
AAA_2
DUF815
Rad17
nSTAND3
PIF1
Mg_chelatase
AAA_18
Clathrin
RNA_helicase
Viral_helicase1
DUF6547
CC_Bre1
AAA_28
TolA_bind_tri
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
AGL63258
LinkDB
All DBs
Position
541303..543000
Genome browser
AA seq
565 aa
AA seq
DB search
MYRALYRVWRPQRFDEIVGQQMITQTLKNAIMTHQTSHAYLFTGPRGTGKTSAAKIFAKA
INCHHLVDGEPCNECETCTAITKGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADYK
VYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRTQRFDFRRITAK
DSYDRMVYILNEKDVTYDEKALRVIAAAAEGGMRDALSILDQVISFGDNTVTLDDALMVT
GSVTKQLLANYVSEVTDHDTKPALETMRQILQEGKDANRFIEDLISYTRDVLLYQQAPEM
VDSVAMGEDDQQFEAFAKQIDAEVLYQMVKTLNDIQQQIRFTTHPDVYLEVLTVKLAQLD
GQAAVQPVAAATVNPEDPTVHKLAQQVEQLQSEVKTLRSQGGSVTKPAPAKPRSSNGPVV
KKVNVSQIYPILGAATKNDLIKVRDVWTDLMNILSVTQRALMHVAQPVAASSEGVVVAFD
YAFVYQKAIDDQTLIDALGNGLDRLMGQAPKIVCVPKEQWPQIRKDYLATHQPGGATSEQ
QAPAKEPVVEEAKNMFGDLVEVQPD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggcactatatcgggtttggcgtccccaacgctttgatgagattgtcgggcaa
cagatgattacccagacactaaaaaatgccattatgacccaccagacgagtcatgcgtat
ctgtttaccggtccccggggaactgggaaaacgtcggcagcaaagatttttgccaaggca
attaactgtcaccatcttgttgatggggaaccttgcaatgaatgtgagacttgtacggcg
attaccaaggggcaactaaatgatgtcatcgaaattgatgcggcttctaataatggcgtg
gaagagattcgtgatattcgggacaaagcgaagtatgctccaacgcaagcggattataaa
gtctacattattgatgaagttcatatgttatcgactggcgcgtttaatgcgttgctcaaa
acgctagaagaacccccggctaacgttatatttatcttagcgacaacggagccccataag
attccattaacgattatttcacggacgcaacggtttgattttcggcggattacagctaag
gatagctacgatcggatggtgtacatcctcaatgagaaggatgtgacctatgatgaaaaa
gcgctacgcgtcattgcagcggctgctgaaggtggaatgcgggatgctttaagtattctg
gatcaagtaatttcgtttggagataacacggttacgttggatgatgcgttaatggtgacg
ggaagtgtgaccaagcagttgctggctaactatgtcagtgaggtcaccgaccatgatacg
aagccggcactagagacgatgcgacaaatcttacaagaaggtaaagatgcgaaccgtttc
attgaagatttgatcagttatacgcgtgacgtgttactctatcaacaggcccctgaaatg
gtcgatagtgtggcgatgggcgaggatgatcaacaatttgaagcatttgccaagcaaatc
gatgctgaagtcctgtatcaaatggtcaagacgttgaacgatattcaacaacaaattcgg
ttcacgacgcaccccgacgtttatttagaagtgttgacggtcaagttagctcagttggat
ggtcaagcggccgttcaaccggtagctgcggcaacggtcaatcctgaagatcccactgtg
cataaactggcacaacaagttgaacagttgcaaagcgaggtcaaaacgttacgttctcaa
ggtggtagtgtcactaaacccgcaccggctaagccgcggtcgagtaatggcccggttgtt
aagaaggttaatgtcagtcagatttatcctattctgggagcggcaacgaagaatgatctc
attaaggtgcgcgatgtttggactgatttgatgaacattttgagtgtgacgcagcgggcc
ctaatgcacgtggcccaaccagttgcggccagttcagaaggtgttgtggttgcgtttgac
tatgcgtttgtttatcaaaaagcgattgatgaccagaccttgatcgatgcactcggaaat
ggtttggatcggctgatgggacaggcacccaagattgtctgtgtgcctaaagaacagtgg
ccacaaattcgtaaggattatttggccactcatcagccaggaggtgcaacatcagagcaa
caagcaccggccaaagaaccggtcgttgaagaagctaagaatatgttcggtgatttagtt
gaagtacagccggactaa
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