Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1138
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Entry
LBP_cg1138 CDS
T02670
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03030
DNA replication
lpr03410
Base excision repair
lpr03420
Nucleotide excision repair
lpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBP_cg1138
03410 Base excision repair
LBP_cg1138
03420 Nucleotide excision repair
LBP_cg1138
03440 Homologous recombination
LBP_cg1138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpr03032
]
LBP_cg1138
03400 DNA repair and recombination proteins [BR:
lpr03400
]
LBP_cg1138
Enzymes [BR:
lpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBP_cg1138
DNA replication proteins [BR:
lpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBP_cg1138
DNA repair and recombination proteins [BR:
lpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LBP_cg1138
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBP_cg1138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Cupin_8
Motif
Other DBs
NCBI-ProteinID:
AGL63884
LinkDB
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Position
1200377..1203025
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AA seq
882 aa
AA seq
DB search
MAKKLLLIDGNSVAFRAFFALHSQLERFVNPDGLHTNAIYGFNTMLDHMIKAVEPTDMLV
AFDAGKTTFRTAMYDNYKGGRAKTPSEFSEQMPYIKQLLDAYGIKHYELKDYEADDIIGT
LAGQADQTGYTTTVVTGDRDLTQLTTEHTTVAVTVKGVSEVEHYTPAHVEEKLGITPAQI
IDMKGLTGDTSDNYPGVTKVGEKTALKLLKQYGTMEGIYENIDAMKQSKMKEHLIEDREQ
AAQAKVLATIKRDAPIDVQLADLSYDGPDLDQLAAFYQKMDFQSFLKKLHLQSDEPATPI
DYTVLTKANLTELQQFTDHVDFYLEMPTPNYHTSAFAGFAIGADDHWYISRDVELLMQPT
VADLLSSTTITKDVFDMKRTTVGLNRLGIQLGKVDFDLLLVSYLLDTNDNSNDLGSLAEQ
HGYTDLPSDETVYGKGVKRAIPEDDDVYFSHLARNLAAIASLKPQLLKELAANEQDQLYD
DIEKPMANVLAQMEIAGITVDSSRLKAMGSQFTERLSEIEQTIYQEAGEEFNINSPKQLG
HILFEEMKLPVIKKTKTGYSTAVDVLEKLAPEAPIVANILQYRQISKIQSTYVVGLLDAI
HSADQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHEGWQIFSSDYS
QIELRVLAHITDDENMQAAFKAGDDIHAATAMRIFHLNSAEEVTPNIRRQAKAVNFGIVY
GISDYGLSQNIGITRKQARSFIDAYFKEYPGVKKYMDEIVQTAKKQGYVETISHRRRYLP
DINSKSFNQRSFAERTAMNTPIQGSAADIIKIAMIKMQDKLQAAGLKATMLLQVHDELIF
EAPKEEIPVLEKLVPSVMDSAVQLAVPLKVESHYGDTWYDAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaattattactgattgatggtaacagtgtggcatttcgggcgttctttgcg
ttgcatagtcaactggaacggttcgtaaatccagacggcctgcataccaacgccatttat
ggcttcaatacaatgcttgaccacatgatcaaggcagtcgaacccacggatatgttagtg
gcttttgatgcgggtaagaccacgtttcgaacagccatgtacgataattacaagggtggc
cgggctaagacgcctagtgagttttctgaacaaatgccgtatatcaaacagctattagac
gcgtatggtatcaaacattatgaattaaaagactacgaagccgatgacattattggcaca
ctggccggtcaagcggatcaaaccggctacaccacgacggtcgtcactggtgaccgtgat
ttgacgcagttgacgaccgagcataccacggtggccgtgaccgttaaaggtgtttctgaa
gtggaacactatacgccggcgcacgttgaagaaaagctgggcatcacaccggcacaaatt
attgacatgaaggggttgacaggtgatacctcggataactatccgggtgtcaccaaggtt
ggtgagaagaccgcccttaaattactcaaacagtatggtacgatggaaggcatttatgaa
aacatcgatgccatgaagcagagcaagatgaaggaacatctgattgaggatcgcgaacaa
gcggcgcaggctaaggtgctagcaacaatcaagcgggatgcgccgattgatgttcaattg
gctgatttatcctatgatggcccggatcttgaccagctggccgcgttttatcagaagatg
gactttcaatcatttttgaagaaattacacctacagtcggacgaaccagcaacgcccatt
gattataccgtcttgacgaaagctaacctgacggaattgcaacaatttaccgatcacgtg
gacttttatttggagatgccaacgccgaactaccacacgtcggcctttgctggctttgcc
atcggagcggatgatcactggtacatcagtcgggatgtggaattattaatgcaaccgact
gtggctgatctcttgagtagcacaacgattaccaaggacgtttttgatatgaaacgcacg
acggtcgggcttaatcgtttgggtattcagctaggtaaagtcgattttgatctcttactc
gtttcatacttattagatacaaatgataacagtaacgacttgggaagtttagctgagcaa
cacgggtacactgacttgccgagtgacgagaccgtttatggtaagggcgttaagcgtgcc
attcctgaagatgatgatgtctactttagtcatctcgcccggaacttggccgcgatcgct
agtttgaagccacagttattaaaggaattggcagccaatgagcaggatcaactttacgat
gatattgaaaaaccgatggccaatgtcttagctcagatggaaatcgccggcattacggtc
gacagcagtcgacttaaagccatgggcagtcagtttacagaacggttgagtgaaattgaa
cagacgatttatcaagaagccggtgaagagttcaatattaattcacctaagcaactaggt
cacatcttgtttgaagaaatgaaattacccgtaatcaagaagaccaagacagggtattct
accgccgtagacgttctagaaaagttagcaccggaagcaccaatcgtcgctaatatttta
caatatcgtcagatttcgaagattcaatcgacctacgttgtcggtttgttagatgccatt
cattctgctgatcaaaaagtgcatacgcgctacttgcaaacgttgacccaaaccggccgg
ttgtcgtccgttgatccaaacttacaaaacattccggtgcgcttggaagaaggacgtaag
attcgacaagcctttgttcctagtcatgaaggttggcagattttctcgtctgattattcg
caaatcgaattacgggttctcgcgcatattactgatgatgaaaatatgcaggccgctttt
aaagcgggtgatgatattcatgccgcaacggccatgcgaatctttcatttgaactcagct
gaagaggtgacgccaaatattcgacggcaagccaaggcggttaactttggaatcgtctat
ggaattagtgattacggcttgtcacaaaatatcggcattacgcgtaaacaggctcgcagc
tttattgacgcttacttcaaagaatatccgggtgtcaaaaagtatatggatgaaattgtc
caaacggcgaaaaaacaaggttatgtggaaaccatttcacatcgacgccggtacttgcca
gatattaattccaagagcttcaaccaacgctcatttgctgaacggacagccatgaatacc
cccatccaagggagtgcggctgatattatcaagattgcgatgattaagatgcaagataag
ttacaggctgcgggtttgaaagcaaccatgctgttacaagttcatgatgaattgattttt
gaagcgccaaaagaagaaattccagttttagaaaaattagtgccaagcgtgatggattcc
gccgtacagttagccgtaccgttaaaggttgagagccactacggtgatacttggtacgat
gcaaaatag
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