Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1139
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Entry
LBP_cg1139 CDS
T02670
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBP_cg1139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpr03400
]
LBP_cg1139
Enzymes [BR:
lpr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBP_cg1139
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBP_cg1139
DNA repair and recombination proteins [BR:
lpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBP_cg1139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AGL63885
LinkDB
All DBs
Position
1203037..1203861
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AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL
LFRFSNGLTMVSHLRMEGKYNVVPRGEDQGKHTHVIFHLTDDRDLLYNDTRKFGRMTLVP
TGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGIGNIYADETL
WMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFSTAFGEAGQFQNHLHV
YGREGEPCERCGTIIEKIKVAQRGTHFCPLEQRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaactgttcgtcgcggcttaaatcgtctggttagcggg
gcaacgattgctagtatcgaggttttttggccgaaaattattaataatgatgtcgatagt
ttcaaacagcgtttagccaaccaaacgatccagaccattgatcggcgggggaagtattta
ttgtttcgctttagcaatggtctgacgatggtgtcgcatttgcggatggaaggcaagtat
aatgttgtaccgcgtggtgaagatcaaggtaaacacacgcacgtgatcttccatctgacc
gatgatcgtgatttgttgtacaacgatacgcgtaagttcgggcgaatgacgctcgtgccg
accggtgaagaaaacacggtggcgggattgcggacaattggcccggaacccgttgctgaa
cagttaacactggcttatatgacggccacttttggcaagtcgaaaaagatgatcaaacca
ctattgttggatcaaagtaagattgcgggcattgggaacatttatgcggacgaaacgcta
tggatgagtaagattcatccaatgcggcctgctaattcactaactactgatgagattgca
acattgcgccaaaacattattgatgaaatggcgatggcaattaaaggtcacggcaccact
gttcattcattttcaacggcatttggtgaggccggtcagtttcaaaatcacttacacgtc
tatggtcgtgaaggggaaccttgcgaacggtgtggcacgattattgagaaaatcaaagtg
gcacagcgagggacccatttttgtccgttagaacaacggttgtag
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