Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1696
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Entry
LBP_cg1696 CDS
T02670
Name
(GenBank) Single-strand DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03410
Base excision repair
lpr03430
Mismatch repair
lpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBP_cg1696
03430 Mismatch repair
LBP_cg1696
03440 Homologous recombination
LBP_cg1696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpr03400
]
LBP_cg1696
DNA repair and recombination proteins [BR:
lpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LBP_cg1696
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBP_cg1696
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LBP_cg1696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGL64442
LinkDB
All DBs
Position
complement(1741291..1743627)
Genome browser
AA seq
778 aa
AA seq
DB search
MLAAKKKWVPRLTTAVDEADVDKLAEAASVTPLVARLLIMRGINTAEEAAPFLHADQQPL
LDPTTMHDMEKAVDRIQEAIIAGDQITIYGDYDADGLTSTSIMYETLDQIGANVNYYIPD
RFKDGYGPNQAAFDRLIAAGTKLFVTVDNGVAGNAVINQVQEQGIDVVVTDHHELPTELP
HAYAIVHPRHPEGSYPFGGLSGAGVAFKVATALLEEVPEELLDLAAIGTVADLVSLTGEN
RTLVTLGLKVLQQTTRPGLAALIQEAGLIPDKLTETNIGFGIAPRLNALGRLQSAQSGVE
LLTTLDDERATALAKQVNQLNEKRQGLVKTISASAIEQAQTPENEARQTLVITGHGWHEG
VLGIVASHVVETTGKPTLVLNEDDDGRLKGSGRSVEAYNLFAAIDPVRESLVAFGGHHMA
VGLTVMADQLATLKEAMEAAAVSQQLADNAQVSLPIDGTLPLAEATLATLADIQALAPFG
TDNPAPLFELVPTTVPQARAIGSDQQHLKLQLGDGTNTIDAIGFSMGTALPAIQASPTDV
TLVGELSENTWNGQTKPQIMVKDIAVTGTQVIDARTQHLSAHLFQAPGVYLFFHQRLLKK
VEQYLGSQAQAVWVGDTKTDLTAVTANQAVFIVDCPDTLADMTQVLSTIALDQLTLYLYR
QESVYLTGMPNRAQFAKLFQFTAAHHDVDIHHQLTLVAKHLHIERNLLIFMIQVFFEVGF
VKINDGVMNGVSNPAKADLHHAPSYQLREQQIVAEETLLYSKSAALQVWVKNQAAVKN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcaaagaaaaagtgggtgccacgtttaacaacggccgttgatgaagccgat
gttgataagttagctgaggcggccagcgtgacccccttagttgcccggttattaataatg
cggggcattaatacggcggaagaagccgccccattcctgcacgcggatcaacaaccattg
ttggacccaacgaccatgcacgatatggaaaaagccgttgaccgcatccaagaggcgatt
attgccggggatcaaattaccatttacggtgattatgatgcagatggtttaacaagtacg
tcaattatgtatgaaacgttggaccaaattggcgctaacgtgaattactatattccagat
cgtttcaaggatggttatggtcctaatcaggccgcttttgaccggctgattgcggctgga
acgaagctgtttgtgacggtggacaacggtgtcgcgggaaatgcggtcatcaatcaagtg
caggaacagggcatcgatgtcgtagtgaccgatcatcatgagttaccgactgaattgccg
cacgcttacgccattgtccatccacgacatccagagggcagttatccatttggtggtctt
tctggtgccggtgtggcgtttaaagtagcgacggcgctacttgaggaagtacccgaggaa
ctattagatctggctgctattggaacggttgctgatttggtcagcttaactggtgaaaat
cggactttggtaacgctcggcctgaaggtcttacagcagacgacccgcccaggcttggca
gcactgattcaagaagccggactgattcccgataaattgaccgagaccaatatcgggttt
ggtattgcccctcggctaaacgcacttggccgtctgcagtcggcgcagagcggtgtagaa
ttattgacaactttggacgatgagcgggcgaccgcgctggccaagcaggtcaatcaattg
aatgaaaaacgccaaggcttggtcaagacaatcagtgccagtgcaatcgagcaagcacag
acgccggaaaatgaggcccgccaaaccttagttattaccgggcatggttggcacgagggt
gttttgggaatcgtcgcgagccacgtggtcgaaacgactggcaaaccaaccctagtgtta
aatgaggatgatgatggccggctcaaaggtagtggtcggagcgtcgaagcgtataattta
tttgccgcaatcgacccagttcgggagtcattggtggcttttggcggtcatcatatggcg
gttggactaactgtcatggccgaccagttagcaacgcttaaagaggcgatggaagcggcg
gcggttagtcagcaattagcagataatgcgcaagtcagtttaccaattgacggcacgtta
ccattagctgaggcaaccttggcaactctggcagatattcaagcgttggccccctttgga
acggataacccggcaccgttgtttgaattagttccaacgactgttccgcaagcacgcgcg
atcggtagtgatcagcaacacttgaaattacaactgggtgatggcaccaatacgattgat
gctatcggtttttcgatgggtactgccttgccggctattcaggcgagtcccaccgatgtg
acgttagtgggtgagttgagtgaaaatacttggaacggtcagacgaagccccaaatcatg
gttaaggatattgcagtgacggggacccaggtgatcgacgcccggacgcaacatctttcg
gcccatttgtttcaagcaccgggggtttacctctttttccaccagcgtctgttgaaaaaa
gttgaacagtatttaggttcccaagcgcaagccgtatgggtgggggatacgaaaacggat
ctgactgccgtgacggctaatcaagcggtcttcattgtcgattgtcctgacacgctggcg
gatatgacccaggtactcagcacaattgcgctcgatcagctgacgctctacttatatcgg
caagaatcggtttatttaacgggaatgccaaatcgcgcgcagtttgcgaaacttttccag
tttaccgcagcgcaccatgatgttgatattcatcatcaattaacattagtggccaagcat
ctgcatattgaacgaaatttgcttattttcatgattcaggtgttttttgaggtcggattt
gttaaaataaatgatggtgtcatgaatggcgtttcgaatccggcaaaagcggatttacat
cacgcccctagttatcagctgcgcgaacaacaaatcgttgctgaagaaacgcttttatat
agtaaatctgcagcgctccaagtatgggtgaagaaccaggctgcggttaagaattga
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