Lactiplantibacillus plantarum subsp. plantarum P-8: LBP_cg1762
Help
Entry
LBP_cg1762 CDS
T02670
Name
(GenBank) Metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lpr
Lactiplantibacillus plantarum subsp. plantarum P-8
Pathway
lpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBP_cg1762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpr03019
]
LBP_cg1762
Messenger RNA biogenesis [BR:
lpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBP_cg1762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGL64508
LinkDB
All DBs
Position
1810397..1812073
Genome browser
AA seq
558 aa
AA seq
DB search
MKRLNVKNNETAVFAVGGLGEIGKNTYGIQFQDEIILIDAGIKFPEDELLGIDYVIPDYS
YLVANQQKIKALVITHGHEDHIGGIPFLLKQINVPIYAGPLALALIKGKLEEHGLLKTTE
LHEINEDTVLKFRKTRVSFFRTTHSIPDTLGIAVQTPPGTIVETGDYKFDLTPITNQPPN
LQKMAHLGERGVLALMSDSTNAERPIWTKSERWVAQSIRHIFEQVEGRIIFATFASNISR
IQEAAQVALEHHRKIAVFGRSMEAAIVNGRELGYLNIPDEAIVDANDLRSLPANKVMILC
TGSQGEPMAALSRIANGTHRQISIEPGDTVIFSSSPIPGNTLSVNHVINELEEAGANVIH
GKVNNIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFILE
NGDVLAFTKDSARVAGHFGAGDVYVDGSGIGDIGNVVLRDRQVLSEEGLVVVVATINLNK
KEIQAGPDILSRGFVYMRESGDLINEARRHVFRTIRRKMKSDKATEATIRNAIIDDLQSF
LFDKTERHPMILPMLIMN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggttaaacgtcaaaaataacgaaaccgctgtttttgcagtcggcggtttggga
gaaattgggaaaaatacctatggtatccaatttcaagatgagattattctgattgatgcc
ggaattaaattccctgaagatgaacttctcggaattgattacgttattccagactattct
tatctagttgcaaatcagcaaaaaataaaagctttagtgattacgcacggtcatgaagat
catatcggtgggattccattcctattaaaacagatcaacgtgccaatctatgccggcccc
ctagccttagccttgattaagggtaagttagaggaacacgggttattaaaaacaactgaa
ttacacgagatcaatgaagatacggtgctcaagttccgtaagacgcgtgtctcgttcttc
agaacgacccattcaattcctgatacactgggaatcgccgttcaaacaccacctggcacg
attgtagaaaccggagactataagttcgatctgacaccaattactaaccagccgccgaac
cttcaaaagatggcgcatctcggtgaacgtggtgtcttggcgctaatgtcagacagtact
aacgccgaacggccaatctggacgaaatctgaacggtgggtggcgcaatcaattcgccac
atttttgaacaagttgaaggtcgaatcatctttgctacctttgcttctaacatctcgcgg
attcaagaggcagcgcaagtcgcccttgaacatcatcgtaaaatcgcggtatttgggcgt
agtatggaagcagctatcgtcaacggacgtgaattaggctatttaaacatccctgacgaa
gccatcgttgatgctaacgatttacgctccctccccgccaataaagtcatgattctatgt
actggttcccagggtgaaccaatggcggcgctctcgcgaattgccaacggtactcatcgc
cagatttctattgaacctggcgacaccgtgatcttttcaagttcaccgattcctggtaat
acgttaagtgttaaccacgtaatcaacgaactcgaagaagccggtgcgaatgtcattcat
ggtaaagtcaataacattcatacatctggtcatggtggtcaggaagaacagaaactgatg
ctacggctgatgaaaccaaagttctttatgccgattcacggtgaatatcgaatgttgaag
attcacaccgaactggccgaacaatgtggtgtgccactagaccatagttttatccttgaa
aatggtgatgtgcttgcctttacgaaggattctgcccgggttgccggtcactttggtgct
ggcgatgtctatgttgatggttctggaatcggcgatattggtaacgttgtgttacgcgac
cgccaagtgctttcggaagaaggtttggttgttgtcgttgctaccatcaatttgaacaaa
aaagagatccaagctggtccagatattctgtcacgtggttttgtctacatgcgcgagtct
ggcgatctaattaacgaagcccggcggcatgtcttccgtacgatccggcgcaaaatgaag
tcggataaagcaaccgaagcgactatccgcaatgcgattattgacgacctgcagagtttc
ttatttgataagactgaacggcacccaatgattctgccaatgttgattatgaactaa
DBGET
integrated database retrieval system
