Lentisphaera profundi: PQO03_03700
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Entry
PQO03_03700 CDS
T08820
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro02024
Quorum sensing
lpro03060
Protein export
lpro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PQO03_03700 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PQO03_03700 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQO03_03700 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpro02044
]
PQO03_03700 (ffh)
Enzymes [BR:
lpro01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PQO03_03700 (ffh)
Secretion system [BR:
lpro02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PQO03_03700 (ffh)
Eukaryotic Sec-SRP protein
PQO03_03700 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_30
AAA_16
AAA_17
ABC_tran
AAA_31
AAA_14
APS_kinase
Thymidylate_kin
YqeC
nSTAND3
AAA_33
AAA_18
ATP_bind_1
DUF6846
NPHP3_N
6PF2K
DO-GTPase1
LupA
Motif
Other DBs
NCBI-ProteinID:
WDE97059
LinkDB
All DBs
Position
1:883254..884663
Genome browser
AA seq
469 aa
AA seq
DB search
MFNNLSDALANTFKTITGKSVLTENNVKEAMEQVRLALLSADVHYDTVNDFVGEVTRQCL
GEKVLKSVKPSEQVVKVVHEELTRLMGTEEAEVDVSGKPAIIMMVGLHGAGKTTTCAKLA
NFYKNQKKKVLLAACDVYRPAAIDQLEALGESINVPVFSDRSTPDVVQIAQNAINTAKSE
GQDIVILDMAGRLQIDQDMVQELIRVKERFQPGEILLTADAALGQEAVSVATHFDKALNI
SGIVLTKLDGDARGGAALSMRKVTGKPIKFITSGEKVTDLEKFRPEGMASRILGMGDIVQ
LVREAEMHLEEDESARIEEKMRKNTFDLNDFVGQLSMLKKMGGFGRILDFIPGGKAMKDM
VNFDEKQVGKIEALISSMTEVEKQQPELINMSRRNRIAKGAGADASDVSQLLKRFQMARE
MMGKVTRGEQAFVPGVPGMSATRGKAPTKDDKKKKRQQQKAARKKNKRK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaatcttagtgatgcactagcaaacacattcaaaacaattacaggtaaatct
gtactaacagagaacaatgtaaaagaagccatggaacaggtgcgtttggcacttttgtct
gcggatgttcattacgataccgttaatgattttgtcggagaagttacccgccaatgttta
ggtgagaaagttctaaaaagtgttaaaccaagtgaacaagttgtcaaagttgttcacgaa
gagctgactcgcttgatgggtacagaagaagccgaagtcgatgttagtggcaaacccgcc
attatcatgatggttggtttacatggtgcgggtaaaaccacaacatgtgcgaaactcgca
aatttttataagaaccaaaagaaaaaggttcttttagcagcatgtgatgtttaccgtcct
gccgctattgaccaattagaggcactcggcgaaagtatcaatgtaccagttttctctgat
cgcagtacacctgatgttgttcaaatcgctcaaaatgccataaacactgctaaatctgaa
gggcaagacattgttatcttggatatggcgggacgtcttcagattgatcaagacatggta
caagaactcattcgagttaaagaacgttttcagccaggtgaaattctccttacagcagat
gcagctttaggtcaagaagccgtctcggtagcgacacactttgataaggctttaaatatt
agcggaattgtcttaacaaaactcgatggtgatgctcgcggtggtgcggcactttccatg
agaaaagtgactggcaagcctattaaattcatcacttcaggtgagaaagtaacggactta
gaaaaattccgtccagaaggtatggcatctcgaattcttggcatgggtgatattgttcag
ctcgtccgtgaagcagaaatgcacctcgaagaagatgagtctgcgcgcattgaagagaaa
atgcgtaaaaatacttttgatctaaatgattttgttggccaattaagtatgctcaagaaa
atgggtggcttcggtcgtatcctcgattttatccctggtggtaaagcgatgaaagatatg
gtcaattttgatgagaaacaagttgggaaaatcgaagctctaatatcttcaatgacagaa
gtagaaaagcaacagcctgagctcattaacatgtctcgccgcaatcgtattgcgaaaggt
gctggagctgatgcaagtgatgtttctcaactattaaaacgttttcagatggcccgtgaa
atgatgggtaaagtgactcgtggtgagcaagcttttgtaccaggcgtacccggtatgagt
gcgactcgaggaaaagcccctacgaaagatgataaaaagaaaaaacgtcagcaacaaaaa
gctgctagaaagaaaaataaacgtaaatag
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