Lentisphaera profundi: PQO03_04120
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Entry
PQO03_04120 CDS
T08820
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lpro
Lentisphaera profundi
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_04120
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQO03_04120
Archaeal homologous recombinant proteins
PQO03_04120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WDE97141
LinkDB
All DBs
Position
1:980635..981849
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AA seq
404 aa
AA seq
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MRIIHTSDWHLGQNFMNKSREPEHRAFLVWLLKQLIEHKVDALVVAGDIFDTGTPPSYAR
KIYFDFLKSAAKEWGGQVVIVGGNHDSVSTLNESGGVLEVVNTFVIGGAADDPIDEVCAL
NKLSGEPGAIIAAVPYLRDRDVRISEAGQSADEKSAALRKGISDHYAEVYEASKIKASEI
GGDLPLIATGHLTTSGSELSEGVRELYIGTLQGYDSASFPEDFDYIALGHLHKKQVMGPR
EQIRYCGSPIPLSFMEAKYERSVNLVDLKAGEKPVVEELVVPIHQKLLSLSGKLNEIIEQ
IQKLPSEDEAYWLEIQIELDGTEGNVISQINDLTLEMKHEVLRVKRQHKNKELRLKRLNA
ERLHEMTVEEVFEKRLGIAELDEDQNGILRHLFKQAKNLVEQKS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaggattatacatacatcggattggcatttgggtcagaacttcatgaataagagccga
gagcccgaacaccgcgcctttcttgtgtggttactgaagcaattgattgaacataaagtc
gatgctctcgtagtcgctggtgatatctttgatacaggcacgcctccaagttacgcccga
aaaatatattttgatttcttaaaaagtgcagcgaaagagtggggtggtcaggtggtgatt
gtcggtggcaaccacgattcagtgagcacacttaatgaatcaggtggagtcttggaagtt
gtcaatacttttgtcattggtggtgcggcagatgacccaatagatgaggtatgtgctttg
aataaactttcaggtgagcccggagccattattgccgcagttccttatttacgggaccgt
gacgtccgaatatcggaagctgggcagagtgctgatgagaagtcagcggcactccgcaag
ggaattagcgatcattatgcggaagtttatgaagctagcaaaataaaagcatctgaaata
ggtggtgatttacctttgattgcaacgggtcatttaaccacctcgggcagtgaactcagc
gagggcgtacgcgagctttatattgggacattacagggctatgattcagcctccttcccc
gaagactttgattatattgctctggggcacttacataaaaaacaggtaatgggtccacgt
gaacaaattcgttattgtggttcacccataccactatcgttcatggaagccaaatatgag
cgctcagttaatttagtcgatttaaaagcaggtgaaaaacctgtcgttgaagaattagtg
gtgccgattcatcaaaagcttttgagcctaagtggcaaattaaatgaaattatcgagcag
attcaaaaacttccaagtgaagacgaagcttactggctcgaaattcaaattgagctcgat
ggtacagaaggcaatgtcataagccaaattaatgatttaacacttgagatgaaacacgag
gttttgcgagtcaagcgtcagcataaaaacaaagagcttcgtttaaagcgactcaatgcc
gagaggttacatgaaatgactgtggaagaagtctttgagaaacgcctaggcatagcggaa
ttggatgaagatcagaatggaatccttaggcatttatttaaacaagccaaaaacttggtg
gagcagaaatcgtga
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