Lentisphaera profundi: PQO03_04140
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Entry
PQO03_04140 CDS
T08820
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQO03_04140 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_04140 (recC)
Enzymes [BR:
lpro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PQO03_04140 (recC)
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQO03_04140 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WDE97145
LinkDB
All DBs
Position
1:complement(991407..994730)
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AA seq
1107 aa
AA seq
DB search
MYVFASNKLEILVERLAKSLYHDKSTPAQLFGQKNDLVIIQSRGMAKWINLEVAKENNIA
TRIDYPFIRTFISTILVRCGYSKEDDIWDRESLKWRIFQILPKIEKRFDILKEYVNEQVT
RRHQLAEQLASLFDEYMIYRHEWLNAWAQNKNYTWVNTENQESYLDRDHENWQKMIWQEL
CKSESKSFQTALHDFIKMGPPRSIDLELPKNISIFGITNMPPVFISFFETLSEHTPVTLF
HFSPCQEYWGDLEQERFTALDKISHTLYLNSEISLQRAQEDEIPDLAHALLKSWGLLGRD
FLNLLIDKTSFDADDHYPVQNLASNLNDIQNGILNLSSDFDSTLKDDTSITINSCHNPRR
ELEVLHDYLLSILKASHQGPAEQQIRPHDIVVMAPNIQDYAPHIQNIFSQQNNNPIEFSI
ADQMASAQALVNSLLKLLHLPKTRLSANDILELIESPDLLQSFQLEPDNIPLIREWIEKS
RIRWAQDAQERKEMGLPEFEQNSWKFGFDRLMAGYAFDDELIYNDSLTCPIGSDGIILGS
FKSLIEKLFKIHDTLKHQQKTLLEWGEYLVTVLEDCFEKTDDNGNEYRLINQSFQKLINQ
GTLLELEEKLEFDIVLKTLSSSLEEESSTHGFISKGITFCSLLPMRSIPVKVICMLGLNE
GQFPRLNQRSGFDLMKMNWKQGDRSMSLDDRYLFLESLLSARQYFYASYVGLNEKDNSEI
PPSVVLAEFIEYLNVSVNGFKVKEQALQAFSARYFTRANDQEKQLHSFSPLHFSAAQSLA
NEEKIRTQDFCPEKLSLATELLDSNGILNVTLDEFASFFKAPAKAFLKTQVGTTLWKEEL
AELAETEAFEQANKLEQYKLKEQFIESIVEDADSAHDILLERTQADGLLPYGENGVQCFE
SIYEDALSIAERLIECQDDQVEESLDFTLEFKTPEVDIHLHCNIKKLFASTYVPYHVGTA
SFKHKLNSLIHYLALVVEEPSYALKYCNKDNIFALNGCLKPKNILQILIELYVAGLQKPL
AFFPGCYEPYLLNINKQKREAPDLDLALKDAAIKWEYDPYNNAWADGHDPLNKLCFGEQF
PEDEASPIFEIFFVLFQELLDSGQEIK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtttttgccagtaataaacttgagatattagtagagaggctcgcaaaatcactc
tatcatgacaaatcaactcccgcacagttatttggacaaaaaaatgatttggtcattatc
cagagtcggggcatggccaagtggataaatcttgaagtcgcaaaagaaaataatattgcc
actcgcattgattaccccttcattcgtacctttatctccactattctcgttcgctgtggc
tattcaaaagaagatgatatttgggatcgtgaaagtttaaaatggcgaattttccaaatt
ttaccgaaaatcgaaaaacgttttgatatccttaaagaatacgtcaatgagcaagtgact
cgccgtcatcagttagccgaacaattggcctcgctctttgacgaatatatgatctatcgt
cacgaatggttgaatgcctgggctcaaaacaaaaattatacttgggtcaataccgagaac
caagagagctaccttgatcgcgatcatgaaaattggcaaaaaatgatctggcaagaactg
tgtaaaagtgaatcaaaatcctttcaaactgccctgcatgactttattaaaatgggtccc
cctagaagtattgatctcgaattgccaaaaaacatctccatttttggtatcactaatatg
cctcccgtttttatctctttttttgaaacgctatcagaacatactcctgtcaccctcttc
cactttagcccctgccaggaatattggggtgaccttgagcaagaacgctttactgccctt
gataaaataagtcatacgctgtatttaaattcggagatctcgctgcaacgtgcgcaagaa
gatgagattcccgacttagctcatgcactcttgaaatcttggggtttattgggccgagat
ttcctgaacctactcattgataaaacatcctttgatgcggatgatcattacccagttcaa
aatctagcttctaatctaaatgacatacaaaacggcatcttaaatctgagctctgacttt
gattccacgcttaaagatgataccagcatcaccattaattcttgccataatccacgtcgt
gagctcgaggttcttcacgattatttactcagtattttaaaagcgagtcatcaaggaccc
gctgagcagcagatcaggccccatgatatcgtggtcatggcacccaatatccaagattat
gcaccacatatccagaatattttttctcagcagaataataatcccatcgagttctcgatt
gccgatcaaatggcttcggctcaagctctagtcaattccctactgaagttacttcatctt
cccaagacacgcttaagtgcgaatgatatccttgaactcattgagagccctgacttgctt
caaagctttcaattagaaccggacaatatccctctgattcgtgaatggattgaaaaaagt
cgcattcgctgggctcaggatgctcaagaacgaaaagaaatgggcttacctgaatttgag
caaaattcgtggaagtttggttttgatcgactgatggcaggttatgcttttgatgatgaa
ttgatttataatgactcactcacttgccccataggaagtgatggcataatcttaggctcc
ttcaaaagcctcattgaaaagcttttcaaaatccacgacacattaaaacatcagcaaaaa
actttacttgaatggggagagtatttagtcacggtactcgaagactgctttgagaaaacg
gatgataatggcaatgagtataggctcattaatcaaagctttcaaaaattaattaatcag
ggcacattactcgagctagaagaaaagctggaatttgatatcgttctaaaaacactgagt
tcatcgctagaggaagaaagcagcacccatggttttatttcaaaaggaatcactttttgt
tccttgctaccgatgcgtagtattcccgtaaaagtcatttgcatgctgggactaaacgaa
ggacaattccctcgtttaaatcaacgtagtggctttgacctcatgaaaatgaattggaaa
caaggtgatcgtagtatgagtttggatgatcgctacctattcttggaaagtctactttcc
gctcgccagtacttttatgcttcctatgtaggtctgaatgaaaaggataatagtgagatc
cctccttcagtcgtgcttgcggaattcattgaatatttaaatgtaagtgtgaatggcttc
aaagttaaagagcaggccctacaggctttttctgctcgctatttcactcgtgccaatgat
caagaaaagcaactacactccttctctccactgcatttctctgcagcgcaaagtttagct
aatgaagagaaaatcagaactcaagacttttgtcctgagaagctgtctttagctactgaa
cttctcgatagcaatggcattttaaatgtcactctagatgaatttgcaagttttttcaaa
gcaccggcaaaggcctttttaaagacacaagttggtacgactctctggaaagaagaacta
gctgaattagccgagaccgaagcctttgagcaggcgaataaacttgagcagtataaactc
aaggagcagttcatagaaagcattgtcgaagatgctgatagcgcacatgatattttgctc
gaaagaacccaggcagatggtttacttccctatggagaaaatggtgttcagtgcttcgaa
agtatctacgaagatgctttaagcatagccgagcgcttaattgaatgccaagatgatcaa
gtagaagaaagcctggatttcaccctcgagtttaaaactccagaagtcgacattcatctt
cactgtaatatcaaaaaattatttgcttcgacttatgttccctaccatgtggggaccgct
tcctttaaacataaattaaatagcctgattcattatcttgccttagtcgtagaagaaccc
tcttatgctttgaagtactgtaacaaagataatatttttgctcttaatggatgcctgaaa
ccaaaaaatattttgcaaatcttgatagaactttatgtagcgggtttacaaaaaccttta
gcctttttccctggctgttatgagccctacttacttaatataaacaaacagaaacgtgag
gcaccagacttggatctcgcccttaaagatgcggcaataaaatgggagtacgatccctat
aataatgcttgggcggatggccacgaccccttaaataaactttgttttggtgaacaattc
cccgaagatgaagcttcgccaatctttgaaatattttttgtgctttttcaagagctctta
gattctggccaggagattaaataa
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