Lentisphaera profundi: PQO03_05320
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Entry
PQO03_05320 CDS
T08820
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lpro
Lentisphaera profundi
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_05320
Enzymes [BR:
lpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PQO03_05320
DNA repair and recombination proteins [BR:
lpro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PQO03_05320
Prokaryotic type
PQO03_05320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
PfaD_N
Motif
Other DBs
NCBI-ProteinID:
WDE97371
UniProt:
A0ABY7VT34
LinkDB
All DBs
Position
1:complement(1327631..1329079)
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AA seq
482 aa
AA seq
DB search
MKKEINVVWLKRDLRLNDHASLAAAEMMPIPYLLLYCFEPNLLRAPDVSERHLDFIRVSL
LEMQRKLKDFHRPLYIVNCEALEAFTQIETEYKIRNILAYQEHGTQRTWQRDKKVLDFCK
KQNIDLLEAEHSAIKRGIQNRDDWDKQWFSLHHEKMINNSYSQSNFCFKEDLFAPVNSLF
DRIKPNLKEMQPPGEDAAHLYLNSFLSDRGKNYQKHISKPALSRKSCGRMSPYLAWGNIS
SKQVYQKVKQSKAYENHKRAYSGFLTRVKWRSHFIQKFEVECSYEYLCLNQAYELMIIDY
NADFIKAWETGHTGYPLLDACMRCLHKTGWINFRMRAMLTSFFCHHLAQDWRDGVYHLAK
LFLDYEPGIHFTQFQMQAGTTGINAVRIYNPIKQSMDHDPEGDFIRKWVPELKELNKNEI
HEPWNIEPMEASMKGYVLLQSYPKPIVDLKVTYGVAKDRIWGLRSNPLVKDERKRILDTH
TR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagaaattaacgtcgtttggttaaagcgggacctccgtttaaatgatcatgct
tctttggcggcagcagaaatgatgcctataccctatttattactctattgctttgaaccg
aatttattaagagcaccggatgtctctgagcgacatctcgattttattcgagtttcttta
ctggaaatgcagcgaaaattaaaggattttcatcgtcctctctatatagtaaattgtgaa
gctctagaggccttcacacagattgaaactgagtataaaataagaaatatattggcctat
caagagcatggaacccaaaggacatggcaacgcgacaaaaaggttttagatttttgcaaa
aaacaaaatattgacttgctcgaagcggaacatagcgcaatcaaacgcggtattcaaaat
cgtgatgattgggataagcaatggttttccttacaccatgaaaagatgattaataatagc
tatagccaaagcaacttttgctttaaggaagatttatttgctcccgtaaattctctcttt
gatcgtataaaacccaatctaaaagagatgcagccccctggtgaggatgccgctcacctc
tacttaaatagttttttatccgatcgcgggaaaaattaccaaaagcacatttcaaaaccc
gcactgagtcgaaaatcctgtggtcgcatgtctccgtatttggcttggggcaatatcagt
tctaaacaagtttaccaaaaggtgaaacaatccaaggcatatgaaaatcacaaaagagct
tattcaggctttttaacgcgagtcaaatggcgcagtcacttcatacaaaaatttgaagtt
gaatgttcttatgagtacttatgcctgaatcaagcttatgagttaatgatcattgattat
aatgcggactttatcaaagcttgggaaacgggccacacgggctatcccttgcttgacgcc
tgcatgcgttgcctccataaaactggatggattaacttccgcatgcgagcgatgctaacg
agctttttttgtcatcacttagctcaagactggcgtgatggggtttatcatttagctaaa
ctctttttagattatgagcccggtattcatttcactcagttccaaatgcaagcaggtaca
acggggattaatgctgtgagaatttataatcctattaagcaatctatggatcatgatcct
gaaggagattttattcgtaaatgggtgcctgaactcaaggaactcaataagaatgaaatt
catgagccatggaatattgaacccatggaagccagcatgaaagggtatgttcttctccaa
tcctacccaaagccaatcgttgatcttaaagtaacttatggcgttgcgaaggatcgcatc
tggggcttgcggagtaacccactcgttaaagatgaaaggaaaagaattttagatactcac
actcgatga
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