Lentisphaera profundi: PQO03_05670
Help
Entry
PQO03_05670 CDS
T08820
Name
(GenBank) alginate lyase family protein
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
lpro
Lentisphaera profundi
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PQO03_05670
Enzymes [BR:
lpro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
PQO03_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Motif
Other DBs
NCBI-ProteinID:
WDE95209
LinkDB
All DBs
Position
1:complement(1420802..1422850)
Genome browser
AA seq
682 aa
AA seq
DB search
MRKNISIISLTFCAALFLSSCQSESSNPVSKGNVDLPLKSLDKSLDWDINKIALEPQEIL
SFLDLDQEALKQVKAHFEQQHYQQASLALLEYYRLQFPRPKKETLSELDLRSANLSLKHY
LKGNKSYPELCRGEEIDWVSKATYQGKMVHDAEWLFQFHRFNWWPALARSYYNTGDTRYF
DEWQSELNSYITKLFPIEKSHPWFIRRGMECENRNRNLIYVFPYFIHSKEFTPELLLNVL
YMQHHQTEQIRKVHAAKGNHLLADLDGVLTSAITFPEFKKSAEWTDEVLAKYPQLMDTEI
FEDGMNKELVFSYHLMYIHLFTDFYKKLEAQNLADRLPQSFHERLEKMYEIYAYQAYPDM
TYCQFGDAWKKKAGTVRRMLIKHHLKAYPENTFYQYLASSGKKGKAPKELSKAYPVSGFY
FLRSGWDEQSIFMPIKANDTSGAWHNNIDNGTFGLYAYGRNFMNDSGSYIYNSDDPKEQA
LRAWFRSSVAHQTMTLDRKNIQLKAKMTHWENEPSLSILTIENQSYPELTHQRTIAFIDQ
EYFLIHDKALGSAKGELRLHFQLTPSEIEMNQSFIKTKFKTGPNLHIHQLNIEKGVQLEK
EKGLISYEQKKMQGRPAWALQTIKKSNHEPQFFHILEPLKEGQKASKFKVIYDKSEGKHS
YTIYKNGIKKIISFMADTQVIQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaatatttcaatcatttccctcactttttgtgccgccctgttcttgtcttca
tgtcagagcgagagctctaatcctgtaagcaagggaaatgtagacctccctttaaaatct
ttggacaaatctcttgattgggatatcaacaagattgctttagaacctcaagaaatcctc
agttttttagatcttgatcaagaagccttaaagcaagtcaaagctcattttgaacaacag
cattatcagcaagcgagtctagcactcttagaatattatcgtttgcaattccctcgtcct
aaaaaagaaactctttcagagctagatttaagatctgccaatctcagcctcaagcattat
ttaaagggaaataaatcttatccagaactctgtcgtggcgaagaaattgattgggtgagt
aaagccacttatcaaggaaaaatggtacatgatgccgagtggcttttccaatttcatcga
tttaattggtggccggccttagcgaggagctattataacacaggtgacactcgctatttt
gatgaatggcaaagtgaactcaattcatatatcactaagctttttcctatagagaaaagt
cacccctggttcattcgtcgaggaatggaatgcgagaatcgcaatcgcaacctcatttat
gtatttccttatttcattcactccaaggaattcactccggaactcttactcaatgtgctc
tatatgcagcatcatcaaactgaacaaattcgcaaagttcatgccgctaaaggcaatcac
ctcttagctgatttagatggtgttttaacttccgccattactttccctgaattcaaaaag
tcagctgaatggaccgatgaagtcttagcgaagtatcctcaattaatggatacggaaatt
tttgaagatggcatgaataaagaattagttttttcttatcacctcatgtacatccacctt
tttactgatttctataaaaaacttgaagcacaaaatttggctgatcgcctaccacaaagc
tttcatgaaagacttgaaaaaatgtatgagatttatgcttatcaagcctatcctgatatg
acttattgccaatttggtgatgcatggaaaaagaaagctggcactgtgcgacgcatgctt
attaagcatcatttgaaagcttatccagagaatactttctatcagtaccttgcgagttct
ggcaaaaaaggtaaagctcccaaagagttatccaaagcttatcctgtcagtggtttttac
ttcttacgttctggctgggatgaacaatcaattttcatgcctataaaagcgaatgacact
tcaggtgcttggcataataatatcgacaacggcactttcggtttatatgcttatggacgt
aatttcatgaatgattcaggtagctatatctacaatagtgatgaccccaaagaacaagcc
ttgagagcctggtttagaagtagcgtagcccaccaaaccatgacactcgatagaaaaaac
attcagctcaaagctaaaatgactcattgggaaaatgaacctagtcttagcattctcacc
attgagaatcagtcatatcccgagctcacacaccaacgtaccattgcttttattgatcaa
gaatatttcctcattcacgacaaggcacttggttctgccaagggagaattacgtcttcat
ttccaactcacaccaagtgaaatcgaaatgaatcaatcctttattaaaaccaaatttaaa
acgggtcccaacctgcatattcaccaactcaatattgaaaaaggcgttcaactagaaaaa
gaaaaaggtctcatttcctacgaacagaaaaaaatgcagggacgtcctgcctgggcccta
caaaccataaaaaaatcgaatcatgaaccccagttttttcatattcttgaacccctaaaa
gaaggtcaaaaagcttcaaaattcaaagtcatttacgataagtctgaaggtaagcactca
tatactatctacaaaaatggtatcaaaaaaataatttccttcatggcagatactcaagtc
attcaataa
DBGET
integrated database retrieval system
