Lentisphaera profundi: PQO03_06240
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Entry
PQO03_06240 CDS
T08820
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lpro
Lentisphaera profundi
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpro03009
]
PQO03_06240 (rimO)
Enzymes [BR:
lpro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PQO03_06240 (rimO)
Ribosome biogenesis [BR:
lpro03009
]
Prokaryotic type
ribosomal protein modification factors
PQO03_06240 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WDE95318
UniProt:
A0ABY7VQ27
LinkDB
All DBs
Position
1:1586737..1588146
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AA seq
469 aa
AA seq
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MPKTAKICVSSLGCAKNLVDTEVMLGSMAKSGVMITGDLDDADIFVVNTCSFIEGARQES
NAAIMDAITWKKKRKSRKVVVAGCLPQRSPEETKKNHPDVDLFLGLDDVASIGTMVNNLL
RKMPSINTIQKDDLPVYLYDENTPRLLVTPAHYAYIKISEGCNHKCSFCAIPTFRGKLRS
RTIQSIVKEAQALLNSGVREIILVSQDSTGYGSDLKDESNTAELLKALDKLDCDEYWVRL
LYLYPTTVTDELIDTFAKSKHIAKYIDMPLQHGADKVLKSMRRGITRKRTEILLDKFRKA
MPGVVMRTTLLVGHPGEEEAEFDQLVDFVKEQQFDRLGVFTYSHEENTHAKSLEDFADPE
TSAARKDKIMAIQQDISYEKNQRFADQDLRVIVDEAFLKTDIDTSDERFDEAVMEEEGIY
YVLSRTEGDAPDVDNLVHFSADESILKQQFVTVHIEEATDYDLYGTLVK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaacagcaaaaatctgcgtcagcagcctaggttgtgcaaagaatctagttgat
accgaagttatgcttggtagtatggccaaaagtggtgtgatgatcacaggtgatttggat
gatgccgatatcttcgttgtcaatacttgtagttttattgaaggtgctcgccaagagtct
aatgccgctattatggatgcgattacttggaaaaagaaacgcaaaagccgcaaggttgtt
gttgctggatgccttccccaaagaagccctgaagaaaccaagaagaatcaccccgatgta
gatttatttctcggccttgatgatgttgccagcattggtacaatggtgaataacctcttg
cgcaaaatgccgagtattaatactattcagaaagatgatttaccggtttacctctacgat
gaaaatacgccacgcttattggtaacacccgctcactacgcctatatcaagatttccgaa
ggctgtaatcataagtgtagtttctgtgcgatcccaaccttccgtggtaaattgcgtagc
cgtacaattcaatctattgttaaagaagctcaagccctactcaatagcggtgttcgcgaa
atcattctcgtttcacaagattctactggttatggttctgatttaaaagatgagtccaat
actgctgagttactcaaagcacttgataagctcgattgtgatgaatactgggtgcgttta
ctctacctctacccaacaactgtgaccgatgagttaatcgatacttttgctaagtctaag
cacattgctaaatacattgatatgccacttcagcatggtgctgacaaagtactcaaatca
atgcgtcgcggtatcactcgcaagcgtactgaaatcctcctagataaattccgtaaggcg
atgcctggtgttgtgatgcgtacgactttactcgtgggtcatcctggtgaagaagaagct
gaattcgatcagctcgtagatttcgttaaggaacagcaatttgatcgcttaggtgttttt
acttattcacatgaagaaaatactcacgctaaatcactcgaagattttgctgacccagaa
acttctgcggcccgtaaagataaaatcatggccattcagcaagacatttcctacgagaaa
aatcagcgtttcgccgatcaagatttgcgtgtcattgtcgacgaagctttcttgaaaact
gatatcgatacaagtgatgaacgctttgatgaagccgtcatggaagaagaaggtatttat
tacgtcttatcacgcaccgagggcgatgctcctgatgtggataacctcgttcacttctct
gcagatgaatcaatcctgaagcagcagttcgtgacagtgcatatcgaagaagccacagat
tacgatttgtacggcacactcgttaagtag
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