Lentisphaera profundi: PQO03_07800
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Entry
PQO03_07800 CDS
T08820
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro03030
DNA replication
lpro03430
Mismatch repair
lpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQO03_07800 (dnaE)
03430 Mismatch repair
PQO03_07800 (dnaE)
03440 Homologous recombination
PQO03_07800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpro03032
]
PQO03_07800 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_07800 (dnaE)
Enzymes [BR:
lpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQO03_07800 (dnaE)
DNA replication proteins [BR:
lpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQO03_07800 (dnaE)
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQO03_07800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Intimin_C
DUF5487
Motif
Other DBs
NCBI-ProteinID:
WDE95623
LinkDB
All DBs
Position
1:1947186..1950908
Genome browser
AA seq
1240 aa
AA seq
DB search
MSNSPYVPLHNHTDFSMLQSACTMPALIKRLEKGGFKAAALTDFGNMCGSIAFTNGLKKI
GIQPILGCFIYLNNSRTQNPSNMSSFNGLILLAKNNIGYQNLCKINAHSHLEGFHIKPRI
DRAFLRQHCEGIIAIIPFHNSDIASDYDNNADPSNSLNFYIDVFGKEHLFLELQKHKRAG
DEEKYPKVISLAKENNIGLVASQTVFYPEEKMAIPHDIVCCVGEKTVHDPQKLRYPEKNY
YLHLPEEMEELFSDIPEALENTRKIAALCDVEFDIREHYPIYPMTNNRTQEQHLLEICVE
GLEKRYNLDHKNPKDKREKEIVERTDFELGVIHKAGYDSYFLVVWDFINWSKTNGIPVGP
GRGSGAGSIVAYLTGITNIDPIEYNLLFERFLNPERISPPDFDIDFCERRRPEVIDYVRN
KYGREKVAQIGTYGTMKAKAVIKDVTRALGYEHTRADQITKLIPEDLKITLHKALFDPKI
KSEELIALKDGEEWVKQIIDNAMPLEGLNRNMGIHACGVIIGDQDLTNLIPLMAGANGEV
VTQFSAGPCEDLGLLKMDFLGLRTLTLIKDTLGLIRKNHGVEIDIETIPIDDRKTYKLFQ
EGKTTAVFQYESAGMQKYMKELQPTVFPDLIAMNALYRPGPIAYIPSFIERKHGREEITY
DCEGMDEYLKETYGITVYQEQVMLLSQKLGSFTKGEADTLRKAMGKKKMDLLAQLKPKFL
DQGEANGHNRKKLEETWEKWEAFASYAFNKSHSTCYAWVAYQTAYLKSHYPAEFMAAVMT
SELGNADKITFFLEECRNLGIKVLPPHVNKSQVSFSVENGAIRFALGAIKGVGTAASETI
VKLRDQGEYESFMNLCERVGHTNVSRKVLEGIIAAGGMDEFGNKRSALTQFIDRALEHSS
SKANDLAMGQMSLFADIEEVNTISPDDNMPEWDLRYKLDLEKTLLGFYATGHPVGEHKQL
IKKFSSASIAKLKSQSEDRVAARLGVMISNLNLRKTKKGKTFASFNAEDLSDGIECICWD
YDKNSEALQENATILIDAEFAREPRTQLIVRNAMPIHQSVSAYTEQTLIIIQEENLLPEN
EEKFKALCTENINIVNDYEQRLLAQTALNMVHKNQSDLLPKFEKYLTDCFSQNSNRLQLE
QLITTADFACFNQNTLLQPDQKRKLLHFLKDIRSTHKLYIRVLTKDDKEIWLEPSNAKNF
LPTWDFINDVNDILGMGSIKIKASPYQGEIRKQYRPASSK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagcccgtacgtacccctccataaccatacagatttcagtatgctgcaatct
gcctgtaccatgcctgcacttattaaaagattggagaaaggaggctttaaagctgccgct
ctaactgactttggaaatatgtgtggttcgattgctttcactaatgggctcaagaaaatt
ggcatccagcctatccttggctgtttcatttatctaaacaattcaagaactcaaaaccct
agtaacatgagttccttcaatggtttgatccttttggccaaaaataacattggctatcaa
aacttatgtaaaatcaatgcccactcacacctagagggttttcatattaaaccgcgcatt
gatcgcgcattcctacgacagcactgcgaaggaattatcgccataatcccctttcacaat
agtgatatcgcctcggattatgacaataacgccgaccccagtaattctctgaatttctac
atagacgtattcgggaaagagcacctcttcctagaactacagaaacataaacgcgccggc
gacgaagagaaataccccaaagtcatcagtcttgctaaagaaaacaatatcggattagtt
gcctcacagacagtcttttacccagaagaaaaaatggccattcctcacgatatagtctgc
tgcgttggtgaaaaaacagttcatgacccccaaaagctccgttacccagaaaagaattac
taccttcacctccctgaagagatggaagagcttttctctgatatcccagaagcactagag
aacactcgaaaaatcgcagctttatgtgatgtcgaatttgatattcgcgagcattacccc
atctacccgatgactaataaccgcactcaagagcaacacctcctagaaatctgtgtagag
ggcttagaaaaacgctataatcttgatcacaaaaaccctaaggataaacgcgaaaaagag
atcgttgaacgaacagactttgaattaggcgtcatccataaggccggctacgactcctat
ttcttagtagtttgggactttataaattggtcaaaaacaaatggcattcccgtaggccca
ggtcgtggatctggcgccggatcaatcgtggcctacctcaccggcattaccaatattgat
cctattgaatacaacttgcttttcgaacgtttcctcaaccccgaacgtatctcccctccg
gattttgatattgacttttgcgagcgtcgcagacccgaagttattgactacgtacgcaat
aaatacggacgtgaaaaagtagcccaaattggtacctatggcaccatgaaagccaaagca
gttattaaagatgtcactcgtgcgctaggctatgaacacactcgtgccgaccaaataaca
aagctcatacccgaagacttaaaaatcactttacacaaagctctatttgacccgaaaata
aaaagtgaagaactcattgcgcttaaagatggcgaagaatgggtaaagcaaattattgat
aatgccatgccccttgaaggccttaatagaaacatgggtatccatgcttgtggagttatt
attggcgaccaagacttaactaacctgataccgctcatggctggcgccaatggcgaggtc
gtcactcaattctctgctggtccttgcgaagacttaggcctcttaaagatggacttctta
ggcctcagaactctgactttaatcaaagatacacttggcctcatcagaaagaatcacggt
gtcgaaattgacatcgaaaccatccctattgacgacagaaaaacttataagcttttccaa
gaaggaaaaacgacagctgtattccaatatgaatctgcaggcatgcagaaatatatgaaa
gagttacaacctacagtttttcctgacttaatcgccatgaatgccctgtatcgccccggc
cccattgcttacataccttctttcattgaacgtaaacatggccgcgaagaaatcacctat
gactgcgaaggcatggatgaataccttaaagaaacttacgggattacagtttaccaagaa
caggtgatgttactttcccaaaaactcggtagcttcactaaaggcgaagccgatacactc
agaaaggccatgggtaaaaagaagatggatcttcttgctcaactcaagcctaagttcctt
gaccaaggcgaagctaatggtcacaatcgtaaaaaactggaagaaacttgggaaaaatgg
gaagcctttgcctcttacgcctttaataaatctcactcaacttgctatgcatgggtcgcc
tatcaaacggcttacctaaaatctcactaccctgctgaattcatggccgccgttatgact
tcggaacttggcaatgctgataaaattacttttttcttagaagaatgccgtaacttgggt
atcaaagtcctccctccacacgtcaataaaagccaagtctctttctccgtagagaacggc
gccattcgttttgctttaggcgccattaaaggtgtcggcactgccgcatcagaaaccatt
gtaaaactccgcgatcaaggcgaatacgaaagcttcatgaacttgtgtgaacgcgtaggg
cacaccaacgtcagtcgcaaagtcttagaaggcatcattgcagccggaggaatggatgaa
tttggaaataaacgctcggctctcacccagtttattgatagagcgttagaacactcaagc
tcgaaggccaacgatttagccatgggacaaatgagcctttttgcagatattgaggaagtc
aatactatttctcctgatgataacatgcctgaatgggacctacgctataagctagacctg
gaaaaaacacttttaggtttctatgccacaggccaccctgttggtgaacataaacaactt
atcaaaaaattcagttcggcctctattgcaaaactcaagagccaaagcgaagatcgtgtg
gctgcccgtcttggagtcatgatttctaacctcaaccttagaaaaaccaaaaaaggaaaa
acttttgcttcctttaacgccgaagatctaagtgatggaattgaatgtatctgttgggac
tatgataaaaatagcgaagctttacaggagaatgcgaccatcctcattgatgctgaattt
gcacgtgaacctcgaactcagctcatcgttcgcaacgctatgcctatccaccaatctgta
tctgcttatactgaacaaacattaatcatcattcaggaagaaaaccttctacccgaaaac
gaagagaagttcaaagctttgtgcacggaaaacattaatatcgtcaatgattatgagcag
cgcctactcgctcaaactgccttgaatatggtccacaaaaaccaaagtgatttacttccg
aaatttgaaaaatatctcactgattgcttttctcagaactccaatcgcctacaactagag
caattgattaccacggctgatttcgcatgcttcaatcaaaacacgctacttcagcccgat
caaaaacgaaaactattacactttttaaaagatattcgttcaacccataagctctatatc
cgcgtattaactaaggacgacaaagaaatttggctagagccctctaatgcaaaaaacttt
ttgcctacatgggatttcataaacgatgtaaatgatattttaggcatgggctccatcaaa
atcaaagccagtccatatcaaggtgaaatcaggaaacaataccgccctgcgagctctaaa
tga
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