Lentisphaera profundi: PQO03_10160
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Entry
PQO03_10160 CDS
T08820
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
lpro
Lentisphaera profundi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
AAA
HTH_30
AAA_2
AAA_19
MCM
AAA_7
HTH_28
HTH_23
nSTAND3
AAA_30
HTH_24
HTH_1
HTH_18
DUF815
Parvo_NS1
TniB
TIP49
SLFN-g3_helicase
HTH_11
ATPase
TadZ_N
T3SS_SCTL
AAA_29
HTH_29
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
WDE96076
LinkDB
All DBs
Position
1:2489475..2490866
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AA seq
463 aa
AA seq
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MNKNKILIVDDEIHTCQGLARALKCEWETFTASNGKEAIKIFAENPVDIILTDVKMPGMN
GIELLRKLKEIRPEVPAIVMSAYNETETVVDAVKAGAYDFITKPFRLDDLDGVLKTAVQS
GSSLQLPSKNLALPIQVPAPSQKAKGSKHTPQIIYQSAIMENLLRMVQQIAPARSSVLIT
GESGTGKEVIANAIHAASKRSKKAFIAVHCAALNANLFESELFGHEKGSFTGANERRIGR
FEAADGGTLFLDEIGEIDAATQVKLLRILESRSFERVGGSETLYSDVRLLAATNRDLRKM
VLAGEFREDLYYRLDVINLEIPPLRDRREDIPALLQYSLISSVEDNQLQVKGFTADAMAR
LCSYDWPGNVRELRNVVERMAVLSQHEYIDLPNLPDHVLLGEGHMREQTKIEEKDKALDV
AENEKVLILKALKESNNNRTLAAERLGMSRRTLHRRLKQFGIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacaaaatactcatcgtcgatgacgagatccatacttgccaaggcttagct
cgtgcccttaaatgtgaatgggagactttcactgcatccaacggcaaagaagctatcaaa
atcttcgcagaaaatccagtcgatatcattttaactgatgtgaaaatgcccggtatgaat
ggcattgaacttttgcgcaaactcaaagagattcgcccagaagtccccgccattgtcatg
agtgcctataacgaaacggaaaccgttgttgatgcggtgaaagctggcgcctatgatttc
atcaccaaaccctttcgtctcgatgacctcgatggagttctaaaaacggcggttcaaagt
ggctcaagcttacagctgccctccaaaaatctcgccctaccaatacaagtccctgctcct
tctcaaaaagccaaaggctcgaaacatactcctcagatcatctatcaatccgcgatcatg
gaaaacctgctgcgtatggtacagcagattgcacctgcacgttcatcagtccttattact
ggtgaaagtggcaccggcaaagaagttattgccaatgctatccatgctgcgagtaagcgt
tctaaaaaagcttttattgctgttcattgtgccgctctgaatgccaatctctttgaaagt
gaactctttggtcacgagaaaggttccttcactggcgcgaatgaaagacgtatcggacgt
tttgaagctgccgatgggggcacacttttccttgatgaaatcggcgaaatcgacgccgca
acgcaagtcaagttgttgcgtatattagagagccgttctttcgaacgcgtaggcggaagc
gaaacactctattccgacgtcagactcctggctgctaccaatcgcgatttacgcaaaatg
gtcctagctggcgaattccgtgaagacctttactatcgtcttgatgtcatcaacctcgaa
atcccacctttgcgggatagacgtgaagatatccctgctctacttcaatatagcttaatc
tcttctgtcgaggataatcaattgcaggtcaaaggctttactgccgatgccatggcacga
ctttgttcctatgattggcctggcaatgttcgcgaactacgcaatgtcgtcgaacgcatg
gcagtacttagccaacatgaatatattgacctccccaatttacccgatcacgtactgctc
ggtgaaggtcatatgagggagcaaacaaaaatagaagaaaaagacaaggcacttgatgtg
gcagaaaatgaaaaagtacttattttgaaagccctcaaagaatctaacaacaaccgcaca
cttgcagcggaacgcctcggcatgagccgacgtactctgcatcgtcgccttaagcaattt
ggaatcacctaa
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