Lentisphaera profundi: PQO03_11735
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Entry
PQO03_11735 CDS
T08820
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lpro
Lentisphaera profundi
Pathway
lpro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PQO03_11735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpro02000
]
PQO03_11735
02044 Secretion system [BR:
lpro02044
]
PQO03_11735
Transporters [BR:
lpro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PQO03_11735
Secretion system [BR:
lpro02044
]
Type I secretion system
Adhesin protein transporter
PQO03_11735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
MMR_HSR1
AAA_29
AAA_15
AAA_23
AAA_21
RsgA_GTPase
ATPase_2
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
WDE98513
LinkDB
All DBs
Position
2:complement(55713..57776)
Genome browser
AA seq
687 aa
AA seq
DB search
MHNSEKIYQDVIELIESLEQDHACLKTLPIILSAVNWQGTSNQLASIISQQPKLDSSSIH
LILLSLGYVLEENKLSQTPLDHIAIAEINQEMLVILEDKGDQLLVHNGEQLSAIDRPHKV
NVFKVLDLTDHSAKIRSWSWTSLQLFWPKIILALGISSILGFLALVIPLFTRHVYDMAIP
SKSINTLSHLAFGAVLAMIFLFSFRFVRVRLAANICRSWTYKLTLSYGRKILNLPFLQSA
NQPYQNLIGRFKEIDAIRSFFISNSGLSLLDIPFLSISLITIFITGGWLVLVPLISIVIY
ALIIPFFNKLISQSSMSSSYAQKEKLNLEIDLARHAQQLEAAALKNSWLARYHDFNKISV
KANRTQIKLSQLMQNSSYVLSQFTSLATMATGIYLVMDQKLTAGDLIAAMMLARRVTSPI
QSSAMSFGRLPKFKNTLAQIDRYIPIEDEKSSGENIFTETAGFKFDNVVFRYNNSQDPAL
AGVSFESEAKSTTAIAGPNNSGKSTLINILTKTIDAQSGKAMIGTSNLKNINAYHFRDEL
SYAGEWVPRSHISIIDFLHELNPQCSLEKIKSLCEAHLFTKELLDCGKTLETELADLDDP
YLKRHLSVMNIFIKDAPIVLLDINLSAHYPKEKALFIYLLEQIHGHKTIFFTTLCAELMQ
LADNALILDKGSVAHFGPIEKKPEVSA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcataactcagaaaaaatttatcaagatgtcattgaacttattgaatcgcttgaacag
gatcatgcgtgcttaaagaccctacccatcattttaagcgctgttaattggcaaggaacc
tccaatcaattggcgagcatcatcagtcaacaaccaaaacttgattcgagctccattcat
ctcattcttcttagcctgggttacgtactcgaagaaaataaactctcgcaaactcctctt
gatcatattgccattgcagagatcaatcaagaaatgcttgttattctagaagataaaggg
gatcaactactcgttcacaacggagaacaactatctgctattgaccgtccgcataaagtc
aatgtttttaaagtccttgacttgactgatcactcagctaaaatccgttcttggtcctgg
accagcctacaactgttttggccgaaaatcatattagctttggggatctcatctatctta
ggcttcttagctcttgtcattccgctcttcaccagacacgtctatgatatggccattcct
tcaaagtcgattaatactttaagccacttagcttttggggctgttctagcaatgattttt
ctgtttagcttccgctttgttcgtgtgagattggctgctaatatttgtcgctcatggacc
tataaactcactttatcatatggccgaaaaatccttaatttaccttttctacaaagtgct
aaccaaccctaccaaaacctgattggtcgttttaaagaaatcgatgccatccgtagtttt
ttcattagtaattcaggcttatcactcttagatatacctttcttaagcatttcactcatt
actatttttatcacaggaggatggttagttcttgtgcctttaatttcgattgtcatttat
gccctaattattcctttctttaataaactcataagccaatcctcgatgagttcttcttat
gctcagaaggaaaagcttaatctcgaaatagatttggctcgccatgctcagcaactcgag
gccgccgcgctcaaaaattcttggttagcacgctatcatgactttaataaaattagcgtc
aaggcaaatcgcactcaaatcaagctgtctcagctcatgcaaaactcatcatatgtattg
agccaatttacgagtctcgccacaatggccacgggtatttatttagtgatggatcaaaaa
ttaactgctggcgacctcattgcggcgatgatgctcgctcgtcgagtgacctcacctata
cagtcctccgctatgtcttttggtcgcttacctaaattcaaaaatacgctcgcacaaatt
gatcgttatattcccattgaagacgaaaaatcttccggagaaaacatctttactgaaact
gcgggctttaaatttgataatgtcgttttccgctacaacaatagccaagatcctgctctc
gctggggttagttttgagtcagaagctaagagtaccacggccattgcaggtcctaataat
agcggaaaatcaactcttataaatatcctcacaaaaactattgatgcccaatcaggcaaa
gctatgatcggcactagtaatttaaaaaatattaatgcttatcattttcgtgatgaatta
tcttatgcgggtgagtgggttccacggtctcacatctctattatagattttcttcatgaa
ctcaatcctcagtgctcattagagaaaatcaaaagtttatgtgaggcccatttgttcact
aaagaacttcttgattgcggtaaaactttagaaactgaattggctgacttagatgatccc
tatttaaagagacacctctcagtgatgaatatctttattaaagatgcccccattgtactg
ctagacatcaatctgagcgctcattatcctaaagaaaaagcgctcttcatctatttactt
gaacaaattcatggacataaaacaatcttcttcacaaccctctgtgccgaattaatgcaa
ctcgccgataacgctcttatccttgataaaggatcagtcgctcactttggccctattgaa
aaaaaacctgaggtttccgcatga
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