KEGG   Lentisphaera profundi: PQO03_15350
Entry
PQO03_15350       CDS       T08820                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
lpro  Lentisphaera profundi
Pathway
lpro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PQO03_15350 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpro03400]
    PQO03_15350 (uvrA)
DNA repair and recombination proteins [BR:lpro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PQO03_15350 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PQO03_15350 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase nSTAND3 AAA_18 AAA_33 AAA_22 DnaJ_CXXCXGXG AAA_14 AAA_25 NACHT ATPase Viral_helicase1 AAA_21 NB-ARC NTPase_1 cobW MeaB DUF87 Zn_Tnp_IS91 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: WDE99210
LinkDB
Position
2:965978..968797
AA seq 939 aa
MQDIFIKGARHHNLKNVDVRIPRNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLDQMEKPEVDQITGLSPAIAIEQRGGVGSPRSIVATSTEIYDYLRLMYAHIGQRHC
PQCGEKVQSQSAEAIVRKAQEFPEGKKMMILAPLVEGRKGEHKDVFEKAIRDGFARVRVN
GEMCRLEDVPDLDKKFKHSIDLVVDRVKTGSKSSRLTDSVETALRYGGGSIIFQLENEDN
EWDEYKLSEHLACDACDISFSELQARDFSFNSPYGACPECHGLGSVQTLDIDMIVPDKHK
AVKDAFPFWKKGPRRLVFYYKNLLESVGKAYDFDLTTRFEDLNDEQRDVLLYGTGKAIRM
VFKNAGRWYDVNKPFEGVARNITRRMNETGSERQREKILSLMVRRDCGSCHGDRLKPESL
AVTVKGLAINKFLHMSIADAADFIQNLDFNETEKVIAGEVSREIDSRLGFLNSVGLNYLN
LNRESSSLSGGEAQRIRLATQLGAGLVGVLYILDEPSIGLHQRDNDRLLETLEHLRALGN
TVVVVEHDTDTIMRADYLIDMGPLAGRLGGEIVFAGPPQDIMKADTLTAQYLSGRKEIAI
PAKRLKGNGKSIKIKGAEANNLQKVNVSLPLGRFVCVTGVSGSGKSTLVHEIIKKSVFKN
LGIGRDRPGKVKSVEGLDEIDKQIVIDQSPIGRTPRSNPATYTGAFDHIRTLYASTVDSK
ARAYKPGRFSFNVKGGRCEECKGDGYRKIEMNFLPDVYVECEVCKGRRYNTETLSVLYKG
CSIADVLEMTIDEAVEFFDKVPKLKKILGMLEEVGLGYLHMGQAATTLSGGEAQRVKLAS
ELCRIPRGHTLYILDEPTTGLHIADIDRLLQVLHRLRDAGNSLVVIEHNLDVIKTADWII
DMGPEGGAGGGQVMVAGTPEKVAKCEESYTGHYLKPILK
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgcaagatatttttatcaagggtgcacgacatcacaatctcaagaatgttgatgtgcga
attcctcgcaataagttggtggtggttacaggtttaagtggatcgggtaaatcgtcctta
gcttttgatacgctctatgcagaaggtcaaagacgttatgtcgagagcttatcttcttat
gcgcgccaatttttggatcaaatggagaagcctgaagtcgatcaaatcacgggtctttct
cctgcaattgcgatcgagcaacgcggtggcgtgggtagccctcgttcaattgtcgcaact
agtaccgagatctatgattacctccgtctgatgtatgctcatatcggccagcgtcattgt
cctcagtgtggcgaaaaagttcagagtcaaagtgccgaagcgattgtgcgcaaagcgcaa
gaatttccagaaggcaaaaagatgatgattcttgcgcctttggtagaaggaagaaagggt
gaacataaagacgtttttgaaaaagcgattcgcgatggatttgcaagggtacgtgttaat
ggtgaaatgtgtcgtttagaagacgttccagatttagataagaaatttaagcacagtata
gatctcgtcgtggatagagtaaaaacgggatccaagagtagtcgtttgactgattcagta
gagacagcacttagatatggcggtggctcgattatttttcagttggaaaatgaagataat
gaatgggatgaatataagctttcagagcatctagcttgtgatgcctgtgatataagtttc
tctgagttacaagcgcgtgatttctctttcaatagtccttacggagcatgtcccgagtgt
catggtttgggttcggttcagactctagatatcgacatgattgtaccggataaacacaaa
gcagtgaaggatgccttccccttttggaaaaaggggccaagacgtttagttttttactac
aagaaccttttggaatcagtgggcaaagcctacgacttcgatttgactacgcgctttgaa
gacctgaatgatgagcagcgcgatgtattactttacggaacgggcaaagcaatacgcatg
gtttttaaaaatgcagggcgttggtatgatgtcaataaaccttttgagggagtggcacgc
aatataactcgtcgtatgaatgaaacgggttccgaacgccaacgtgagaaaattctcagt
ctcatggttcgtcgtgattgtggttcttgtcatggtgatcgactcaaacccgagtcctta
gccgtaacggtcaaaggtttagccatcaataaatttttgcatatgtctattgctgatgcg
gctgacttcattcaaaatctcgattttaatgaaacggagaaagtcattgctggtgaggtg
agtcgtgaaattgattcacgtttaggttttctcaattcagtgggcttaaattatcttaat
cttaatcgtgagtcgtcttctttgtcaggtggagaagcccagaggattcgcttggcaaca
cagttaggagccggcttagtcggagttctctacattctcgatgaaccgagcattggatta
caccaacgagataatgaccgtttattagaaactttggaacatttgcgtgctttaggcaat
actgttgtggtagtggagcacgataccgataccatcatgcgtgcagattatttgatcgat
atgggacccttggcggggcgccttggaggagaaattgtttttgcaggtcctcctcaagat
attatgaaggccgatacccttacagcgcaatacctgagtgggcgcaaggaaattgcgatt
cccgcaaaacgtctaaaaggcaatggtaagagtattaaaatcaaaggtgccgaagccaat
aatttacagaaagtcaatgtcagtttacctttgggacgctttgtttgtgtaacgggtgtt
tcaggttcgggtaaatcgactttagtacacgaaattataaaaaagagtgtttttaaaaat
cttggaatagggcgtgatcgtccaggaaaagtcaaatcagttgagggcttagacgagatt
gataagcagattgtgatcgatcagtcacctattggccgaactcctcgttcaaatccagca
acgtatacgggggcattcgatcatattcgtacgctttatgcctcgacagtcgattcaaaa
gctagggcttataaacccggtcgctttagtttcaatgtcaaaggtggacgttgcgaagag
tgcaaaggagatggctaccgaaaaatcgaaatgaatttcttacctgatgtttatgtggaa
tgtgaggtctgcaaagggcgtcgttataataccgagaccttaagtgttctttacaaggga
tgcagtattgccgatgttttggaaatgactattgatgaagccgttgagttttttgataaa
gttccaaaacttaaaaagattttagggatgttagaagaagtaggtctaggctatttacac
atgggccaagcagctacgactctttctggaggagaagctcaacgagtgaagttagcttca
gaactttgtcgtattcctcgtggtcatacactgtacattctcgatgagcctaccacgggt
ttacatattgctgatattgatcgcctcttacaagttcttcacagacttcgcgatgcgggt
aatagtctggttgttattgagcataatctcgatgtcattaaaacggcggactggattatc
gatatgggcccagaaggtggtgcaggcggtggtcaagtaatggttgcgggtactcccgaa
aaagtcgccaaatgtgaagagtcttacactggtcactatttaaaaccgatcctaaaataa

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