Lentisphaera profundi: PQO03_15730
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Entry
PQO03_15730 CDS
T08820
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro03420
Nucleotide excision repair
lpro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQO03_15730
03430 Mismatch repair
PQO03_15730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_15730
Enzymes [BR:
lpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQO03_15730
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQO03_15730
MMR (mismatch excision repair)
Other MMR factors
PQO03_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WDE99286
LinkDB
All DBs
Position
2:complement(1070452..1072407)
Genome browser
AA seq
651 aa
AA seq
DB search
MSLNNNQQLAVNHESGPILLLAGAGTGKTHTLCCRVARLIESGVPAEKILMLTFTRKAAD
EMKQRVESINDQHCAVLGGTFHSIAFNDLKYLGLMKNLGGIFDDSAQAKYLRKELKKKSF
EKISDTSPREFMRFFSLCSNTLEDERIVLSQHFPSLVVHADLVLTLSKNYVKHKEKLKAF
DYDDILKIWLSALKNKESLSLAQQCQYILVDEYQDTSKLQIEILKNLCRHHQNIMAVGDD
CQSIYSFRGALPEQIAHFTTDFPGSKSLALEENYRSTKQILDFANSCMIDAKNIIPKELR
PASDCEGNEPDFFYSSYYKKTEKEICRDIFDLRTKGTPFEQQAILYRSSMHCLYLELELT
RQGIPYKKYGGKKITDKSHVKKFSALLSYVFSDEIHILALQQCLELMPGLGIKTLEKILT
QLNEGLELKDINLPLKSQVSFEQLNSFRKMSISKNNLEDLIAFACPLIFKDSEDNSKKIK
DLNALSEELRRIQNWDDFFSDIILNIELNNDDDMDAVVLSTIHSAKGKEWQSVHILAINE
NAIPIQNSNNLEEERRLLYVAVTRAKQHLKLYVENSKELKEVSRFVKHLIPQKNPTPAMA
FNHQSLNHQSLNQYVNTPAEVQELVYVSENTPETALVQSDMDELTYIPFYD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaaacaataatcagcaacttgccgtcaatcatgagagtggccctatactactt
ctcgccggagcaggcacaggaaaaacacacaccctttgctgccgtgttgctagattaatt
gaatcgggagttcccgccgaaaaaatcctcatgctcacctttactcgtaaagctgcggat
gaaatgaagcaacgagttgaatccataaatgatcagcactgcgcagtcttaggcggaacc
tttcattcaattgcctttaatgacctaaagtacttagggctcatgaaaaatttaggcgga
atatttgatgacagtgcacaagccaagtatttgcgcaaagaattaaaaaagaagtcattt
gaaaaaatatccgatacctcccctcgtgagttcatgcgctttttttctctctgctcaaat
acactcgaagatgagcgtatcgttttaagtcaacacttcccctcattagtggttcatgca
gacttggttttaacactctcaaaaaattatgtaaaacataaagagaagctcaaagctttt
gattacgacgatattttaaaaatatggctatcggccctcaagaataaagagagcttaagc
ctggctcaacaatgccaatacatccttgtcgatgagtaccaagatacttcaaagcttcaa
atagagatactcaaaaatctctgtcgccatcatcagaatatcatggccgtaggtgacgat
tgtcagagtatttattcttttcgtggtgccctaccagaacaaatagcccatttcactact
gacttccctggatcaaaaagcctagcacttgaagaaaattatcgcagtacgaaacagata
ctagacttcgctaactcctgtatgattgacgctaaaaacatcatccctaaagaactacgg
cccgcatcagattgcgaaggcaatgaacccgattttttctacagctcctactataagaaa
actgagaaagaaatctgtcgagatatttttgacttacgcaccaaaggcacaccctttgag
caacaggcaatactataccgttcgagtatgcactgcctctacttggaactggaattaact
cgccaaggcattccctataagaaatacggtggtaaaaaaatcaccgacaagagccatgtg
aaaaaattctccgccctgctctcttacgtcttcagtgatgaaattcatatactcgcactt
cagcaatgcttagaactcatgccaggtttaggcatcaaaactcttgagaaaatacttact
caactcaatgaaggccttgaattaaaagacataaatctaccgctcaaatcacaagtgagc
tttgagcaactcaatagttttagaaaaatgagtataagcaaaaataaccttgaagactta
atcgcctttgcttgccctttaatttttaaggattccgaagataattcaaaaaaaataaaa
gatcttaatgccctaagtgaagaactgagacgcattcaaaactgggatgattttttctcc
gacatcattttaaatattgaacttaataatgacgacgatatggatgccgttgttttatct
actatccattccgccaagggtaaggaatggcaaagcgttcacatccttgccattaacgaa
aatgcgatacccatacaaaacagcaataacttagaagaagaacgtcgcctcttatacgtc
gccgtaactcgtgccaagcagcatttaaaactctatgttgaaaattctaaagaactcaaa
gaagtttcacgctttgtaaaacatctcattccacaaaaaaatcccactcctgctatggcg
tttaatcatcagagtttaaatcatcagagtttaaatcaatacgtaaatacacccgcagaa
gtccaagaactcgtttatgtcagcgagaacactcctgagaccgctctcgttcaatcagac
atggacgaactcacttatatacctttttatgactag
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