Lentisphaera profundi: PQO03_16955
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Entry
PQO03_16955 CDS
T08820
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro00061
Fatty acid biosynthesis
lpro00071
Fatty acid degradation
lpro01100
Metabolic pathways
lpro01212
Fatty acid metabolism
lpro02024
Quorum sensing
lpro04146
Peroxisome
Module
lpro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PQO03_16955
00071 Fatty acid degradation
PQO03_16955
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PQO03_16955
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQO03_16955
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lpro01004
]
PQO03_16955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpro04147
]
PQO03_16955
Enzymes [BR:
lpro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PQO03_16955
Lipid biosynthesis proteins [BR:
lpro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PQO03_16955
Exosome [BR:
lpro04147
]
Exosomal proteins
Exosomal proteins of breast milk
PQO03_16955
Exosomal proteins of breast cancer cells
PQO03_16955
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF6070
Motif
Other DBs
NCBI-ProteinID:
WDE97519
UniProt:
A0ABY7VUU6
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Position
2:1410052..1411794
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AA seq
580 aa
AA seq
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MQTTQDNIDTSVCTVSQLLEIGLRNSSTDTFLSDWNGKSWDTISYKNFYDTVHEIAYGLL
SLNLEPGAKIALFVNNDSRFCLYDTAASIAGFITVPLHLTFNDQSISYVLEHSEATLCIV
NDKAQYQRLKELNPKIQYLLTDEEDIEEALSGPGLIKNSQKVALPKITGDSPLTIIYTSG
TTGQPKGVLLDHKNLIILNSIVVSDLSDCIKKHDREISFLPLSHIFAKSAIYRWLWHGTS
VYFTNPDQIMMHIAMVKPQTFSTVPHLLEKIYLHIANGAENNPQVDPQIYQKAFEFAHVY
DSTNAEHQAMYQAFSPIYQAWQNIFGGELSFICSGGAHLRTELCRFLNNVGIIILEGYGM
TEAPVLSVNPFRAPKPGTAGKAFSHTKIKIAEDGEILVSGPQIMENYYKDPEATAEVLKN
DWLHTGDIGHIDEDGYLYITDRKKNIFKMSTGKFVIPTPLETALRADPFIAHVLVIGEDK
RFCSALIFPELSLLPRLAKKFQLDSLNPHEICQRPELRAYYQGQIDKANTQLPKWSQIKQ
FQIIHEELSPLNGLLTATLKVKRKAVKINYDHIIQEIYKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacgcaggataatatagacacgtctgtatgtacagtttcacagctcttggaa
ataggcctaaggaattcttcgacagatacatttttatctgattggaatggaaaatcttgg
gataccattagctacaagaacttttacgatacggttcatgaaattgcttacgggctactt
tcactcaacttagaaccaggtgcaaaaattgcactattcgtcaataacgattctcgcttc
tgcctctacgatacagccgcttccattgccggtttcattaccgtaccacttcaccttact
ttcaatgatcaatcgatttcctatgtacttgaacatagcgaggccacgctctgcatagtc
aatgacaaagctcaataccaaagactcaaagaactcaatcccaaaattcagtatctactt
actgatgaggaagatattgaagaagcgctcagtggccctggattaatcaaaaattcacaa
aaggtggcgcttcccaaaatcacgggtgattcaccactcacaattatctacacctctgga
accaccggccaacctaaaggcgtcctgctcgatcataaaaatctcatcattctcaactct
attgtcgtttcagatttatcggattgcattaaaaaacacgatcgagaaataagcttctta
cccctgagccacatctttgcgaaatctgccatttatcgctggctctggcatggcacgagt
gtttacttcaccaaccccgaccaaatcatgatgcacattgcgatggtcaagccccagact
ttctcgactgtgccccaccttttagaaaaaatatatcttcatattgctaatggtgccgag
aacaaccctcaggtcgatcctcaaatctatcaaaaagcctttgagtttgcccatgtctat
gattctactaatgctgagcatcaagctatgtatcaagctttctcgccgatttatcaggca
tggcaaaatatctttggtggggagctatcatttatatgcagtggtggagctcacctcaga
accgagctttgtcgtttcctcaataatgtcggtatcatcattctcgagggctatggcatg
accgaggcaccggtcctttccgtcaatcctttccgcgcccctaaacctgggactgcaggc
aaagcttttagtcatacaaaaatcaagattgccgaagatggcgaaattcttgtgagtggt
cctcaaattatggagaactactacaaagaccccgaagctaccgccgaggttttgaaaaat
gattggttgcataccggcgatattggtcacattgatgaagacggttacctctatatcact
gaccgtaaaaagaatatctttaaaatgtctacgggtaaatttgttatcccgactccgctc
gagaccgcacttagggccgatccctttattgctcatgtactcgttataggcgaagataaa
cgtttctgctcagcgcttatttttcccgagctcagcctgcttccgcgcttggcaaagaaa
ttccaactcgactcactcaatccccacgagatatgccaaaggcctgaactcagagcctat
tatcaaggccagatcgataaagccaacacccaattacccaagtggtcacaaattaaacag
ttccaaattattcacgaagagctcagtcccttaaatggactgctcactgcaacattaaaa
gtgaagcgcaaagctgtcaaaattaattacgatcacatcattcaagaaatttataaaaaa
taa
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