Lentisphaera profundi: PQO03_17495
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Entry
PQO03_17495 CDS
T08820
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
lpro
Lentisphaera profundi
Pathway
lpro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PQO03_17495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpro03021
]
PQO03_17495
Transcription machinery [BR:
lpro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PQO03_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
JHD
DUF3945
Motif
Other DBs
NCBI-ProteinID:
WDE97625
UniProt:
A0ABY7VTU0
LinkDB
All DBs
Position
2:1556608..1557456
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AA seq
282 aa
AA seq
DB search
MVANSLDNYLKHLGDYDLIDSDREIVLANKIAQGDESAIQELTLANLRLVVTISKQYMKR
GVALAELIAEGNHGLVKAAQRFRPGHGAKFASYAAWWIKQNIRRAIRDSQRIVRVPVQSL
LRMQKIKNARLKIQQKNGKVSDDNAVAKEVGISPRLVRSTSLHVDTSSFSINEQISQDGK
ATEKGELIPDTQAASPREVMEFHDGYKTLMEIVRQELTEREYKILSARFGLDDGHAKTLS
ETSALVNLTSERVRQLQQEALRKLRCKLAPHELQGLIYRSAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtagctaactcactggataactacttaaagcacttaggcgattacgatcttattgat
agcgatagagaaattgtactagccaataaaattgcacaaggcgatgaatctgcaattcaa
gaacttactctagccaacctgcgcttagtcgtaacaatttctaaacaatatatgaaaaga
ggcgttgcattagctgagttaattgctgaaggcaatcacggcttagttaaagcggcccaa
cgcttcagacctggtcacggcgctaaattcgcttcttatgcagcttggtggattaaacaa
aacatccgcagagctatccgcgatagccaaagaattgttcgtgtaccagtacagtccttg
ctacgtatgcaaaaaatcaaaaatgctcgtttaaagattcagcaaaaaaatggtaaggtc
agtgacgacaatgcggtcgctaaagaagttggaattagcccaagattagttagatctacc
agcctgcacgttgatacttcttcattctcgatcaatgaacaaatcagccaagatggtaaa
gctactgaaaagggtgagctcattccagatactcaagctgcaagtccacgtgaagttatg
gagttccatgatggctacaaaactttgatggaaatcgttcgccaagaacttactgaacgc
gaatacaaaattctttctgcacgtttcggcttggatgacggtcatgctaaaacactctct
gaaacgagtgcattggtgaaccttacttccgaacgagttcgtcagcttcaacaagaggcc
ttaagaaagctgcgttgcaaattagctcctcatgagcttcaaggtttgatttatagatct
gccgcatag
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