Lentisphaera profundi: PQO03_20050
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Entry
PQO03_20050 CDS
T08820
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lpro
Lentisphaera profundi
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpro03032
]
PQO03_20050 (gyrA)
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_20050 (gyrA)
Enzymes [BR:
lpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PQO03_20050 (gyrA)
DNA replication proteins [BR:
lpro03032
]
Prokaryotic type
DNA Topoisomerases
PQO03_20050 (gyrA)
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PQO03_20050 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GpA_ATPase
Beta-prop_CGLA
DUF562
Motif
Other DBs
NCBI-ProteinID:
WDE98115
UniProt:
A0ABY7VV62
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All DBs
Position
2:2195411..2198050
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AA seq
879 aa
AA seq
DB search
MSDNQQDFSTVTPQGIEKLLSDAYLQYSMSVNVGRAIPDVRDGLKPGMRRVLFAMDKLNL
RKSSSYMKCARVVGDVIGKYHPHGDGSVYDTMVRMAQDFSMRGVLIDGQGNFGSIDGDSA
AAYRYTECRMERLAEELLTDLDKNTVDMQPTFDGSQNEPTVLPARYPNLLVNGTTGIGVG
MATSIPPHNLGEVINATVALLEQPSITIEEMMQHLPGPDFPTSGISIGFDGIRRLYETGR
GGVHLRGRAEIVEKNGKEQIIITEIPYAVNKENMVKKIADLVNNKVITGISSLNDESSSR
VGIRVVVGIKTNAMATVVINQLYKHTQLAVSIGCQFLVVDNKQPKTLNLKQLLQAYLDHR
LEVITRRIKFELEKAERRAHILEGLLKAVDHIDEVIKIIRGSSNREDAHNQLKERFELSN
EQAKAILDMRLGQLTGLAIDELTAEYEKLMKEIAHYRELLADRQLRLDVVKDELIEVRDK
FADARRTEMRPGERDINFEDLIARASATITISNEGYIKRVPTDIYRTQNRGGKGVKGMET
KDEDFVKDLTTACTHDYIMFFTNLGRMHWLKVYDIPEATRTSKGKAMVNLLEFEKGEFVR
AIISVDKVDDEDRFIMMATRNGVVKKTALAAFKNMRKKPIKAIVMDEDDDLIEAKLTDGN
KKIILSTRDGIACHFRESDCRTQGRVTRGCRGIRLSETDKLVAMSIVEEGEDILVVTSKG
MGKRSCVDDYRLTKRGAKGVRNIKLKEGDHVVEVMMIEDTDEIIMTTIEGIMVRISAEPI
RSLGRASQGVTIMKFKKASDVIISASRVVEVEGDKKEELDEDGQPIVKPVELDEDGNPIV
KPVELDEDGQPIVKEESAETTEAPSEEAESNESKDDSED
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatcaacaagatttttctacagtcactcctcagggtattgaaaagctcctc
tcggacgcttacctccaatactcaatgtcagttaacgttggccgtgccatcccagatgtt
cgtgatggactcaagcctggtatgcgccgcgtactctttgcaatggataaactcaacctc
cgcaaaagcagctcctacatgaagtgtgctcgtgtagttggtgatgttattggtaaatat
cacccgcacggtgatggttccgtctacgatacaatggttcgtatggctcaggacttctca
atgcgcggtgttctcattgatggccaaggtaacttcggttccatcgatggtgactcagcg
gcggcttaccgttatacggaatgtcgtatggagcgcctcgcagaggagcttctcacggac
ctcgacaagaacacggttgacatgcagcctactttcgatggtagccaaaatgagcccact
gtacttcctgcgcgttaccctaacctactcgtcaatggtactactggtatcggcgtgggt
atggctacaagtattcctccccacaacttgggcgaggttatcaatgctacagtagcactt
ctcgaacagccttcgatcactattgaagaaatgatgcagcaccttccgggtcctgacttc
ccaacttcaggtatttcaatcggttttgacggcattcgtcgcctttatgaaacaggccgt
ggcggtgttcacctccgtggtcgtgccgaaatcgttgaaaagaacggtaaagagcaaatc
attatcaccgagattccttacgctgttaataaagagaacatggttaaaaagattgccgac
ttggtgaacaacaaagtcattactggtatttcttcgcttaacgatgaatcatcttcacgt
gtaggtattcgcgttgttgttggtatcaaaaccaacgctatggctacggttgttatcaac
cagctctacaaacacacgcaactcgcagtttcaatcggttgccagttcctcgttgtagat
aacaaacaacccaagaccctcaacctcaagcaacttctccaagcttacttggatcaccgt
ctcgaagttatcacacgccgaatcaagtttgaactcgaaaaagctgagcgccgggcgcac
atcttagaaggtttactcaaagccgtagaccacattgatgaagttatcaaaatcatccgt
ggctcaagcaaccgtgaagatgctcacaaccaactcaaagagcgtttcgaactctccaac
gagcaggccaaagcaattctcgacatgcgtctcggtcaacttactggcctagcaattgac
gaactaactgctgagtacgaaaaactcatgaaagagatcgctcattaccgcgaactctta
gctgaccgtcaactccgtctcgacgtagtgaaagatgagctcatcgaagttcgcgataaa
tttgctgatgcgcgtcgtactgaaatgcgtcctggcgaaagagatatcaatttcgaagat
ctcattgctcgtgcttctgcaactatcacgatttctaacgaaggctacatcaagcgtgta
cctaccgatatctaccgcactcagaaccgcggcggtaaaggcgttaaaggcatggagact
aaggacgaggatttcgtaaaagatctcaccacggcctgtactcatgactacatcatgttc
ttcaccaacttgggccgtatgcactggctcaaagtttacgacatcccggaagccactcgt
acttccaaaggtaaagcaatggtcaacctcctcgaattcgagaaaggtgaatttgtccgc
gctattatctctgtcgataaagtagacgacgaagatcgcttcatcatgatggcgactcgt
aatggtgttgttaagaaaactgctctcgcagccttcaaaaacatgcgtaaaaaaccaatt
aaagccattgttatggacgaagatgatgacctcatcgaagccaaacttactgacggcaat
aaaaaaatcattctctcaactcgtgatggtatcgcttgtcacttcagagaatcagattgc
cgtacgcaaggtcgcgtaactcgtggttgccgtggtatccgtctctcagagacagataaa
ctcgtcgccatgtctatcgttgaagaaggcgaagatatcctcgttgtaacttccaaaggc
atgggcaaacgctcttgtgtcgatgattatcgtctaactaagcgtggcgccaaaggtgtt
cgtaatatcaaactcaaagaaggcgaccacgtcgttgaggtaatgatgatcgaagatacc
gatgaaatcatcatgaccactatcgaaggcatcatggttcgtatctcggctgagccaatc
cgttcactcggacgtgcttcacaaggtgtcactatcatgaaattcaagaaagcctctgat
gtcatcatttccgcttcacgtgtagtcgaagtcgaaggcgacaagaaagaagaattggat
gaagatggtcagcccattgtaaagcctgttgaactcgacgaagatggaaaccccattgta
aagcctgttgaactcgatgaagatggtcagcccattgtaaaagaagagtccgctgaaact
acggaagctccttccgaagaagctgaatcaaatgagtccaaagacgattcagaagattaa
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