Lactiplantibacillus plantarum ST-III: LPST_C0530
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Entry
LPST_C0530 CDS
T01324
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma/tau subunit DnaX
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03030
DNA replication
lps03430
Mismatch repair
lps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPST_C0530 (dnaX)
03430 Mismatch repair
LPST_C0530 (dnaX)
03440 Homologous recombination
LPST_C0530 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lps03032
]
LPST_C0530 (dnaX)
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C0530 (dnaX)
Enzymes [BR:
lps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPST_C0530 (dnaX)
DNA replication proteins [BR:
lps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPST_C0530 (dnaX)
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPST_C0530 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_22
AAA_5
AAA_19
AAA_24
TIP49
AAA_16
AAA_7
AAA_assoc_2
AAA_14
DnaX_C
Sigma54_activat
TolA_bind_tri
AAA_2
PIF1
Rad17
Mg_chelatase
RNA_helicase
DUF815
AAA_18
nSTAND3
Viral_helicase1
DUF6547
AAA_28
Clathrin
Motif
Other DBs
NCBI-ProteinID:
ADN97752
LinkDB
All DBs
Position
569138..570835
Genome browser
AA seq
565 aa
AA seq
DB search
MYRALYRVWRPQRFDEIVGQQMITQTLKNAIMTHQTSHAYLFTGPRGTGKTSAAKIFAKA
INCHHLVDGEPCNECETCTAITKGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADYK
VYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRTQRFDFRRITAK
DSYDRMVYILNEKDVTYDEKALRVIAAAAEGGMRDALSILDQVISFGDNTVTLDDALMVT
GSVTKQLLANYVSEVTDHDTKPALETMRQILQEGKDANRFIEDLISYTRDVLLYQQAPEM
VDSVAMGEDDQQFEAFAKQIDAEVLYQMVKTLNDIQQQMRFTTHPDVYLEVLTVKLAQLD
GQAAVQPVDAATVNPEDPTVHKLAQQVEQLQSEVKTLRSQGGSVTKPAPAKPRSSNGPVV
KKVNVSQIYPILGAATKNDLIKVRDVWTDLMNILSVTQRALMHVAQPVAASSEGVVVAFD
YAFVYQKAIDDQTLIDALGNGLDRLMGQAPKIVCVPKEQWPQIRKDYLATHQPGGATSEQ
QAPAKEPVVEEAKNMFGDLVEVQPD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggcactatatcgggtttggcgtccccaacgctttgatgagattgtcgggcaa
cagatgattacccagacactaaaaaatgccattatgacccaccagacgagtcatgcgtat
ctgtttaccggtccccggggaactgggaaaacgtcggcagcgaagatttttgccaaggca
atcaactgtcaccatcttgttgatggggaaccttgcaatgaatgtgagacttgtacggcg
attaccaaggggcaactaaatgatgtcatcgaaattgatgcggcttctaataatggtgtg
gaagagattcgtgatattcgggacaaagcgaagtatgccccaacgcaagcggactataaa
gtctacattattgatgaagttcatatgttatcgactggcgcgtttaatgcgttgctcaaa
acgctagaagaacccccagctaacgttatatttatcttagcgacaacggagccccataag
attccattaacgattatttcacggacgcaacggtttgattttcggcggattacggctaag
gatagctacgatcggatggtgtacatcctcaatgagaaggatgtgacctatgatgaaaaa
gcgctacgcgtcattgcagcggctgctgaaggtggaatgcgggatgctttaagtattctg
gatcaagtaatttcgtttggggataacacggttacgttggatgatgcgttaatggtgacg
ggaagtgtgaccaagcagttgctggctaactatgtcagtgaggtcaccgaccatgatacg
aagccggcactagagacgatgcgacaaatcttacaagaaggtaaagatgcgaaccgtttc
attgaagatttgatcagttatacgcgtgacgtgttactctatcaacaggcccctgaaatg
gtcgatagtgtggcgatgggcgaggatgatcaacaatttgaagcatttgccaagcaaatc
gatgctgaagtcctgtaccaaatggtcaagacgttgaacgatattcaacaacaaatgcgg
ttcacgacgcaccccgacgtttatttagaagtgttgacggtcaagctagctcagttggat
ggtcaagcggccgttcaaccggtagatgcggcaacggtcaatcctgaagatcccactgtg
cataaactggcacaacaagttgaacagttacaaagcgaggtcaaaacgttacgttctcaa
ggtggtagtgtcactaaacctgcaccggctaagccgcggtcgagtaatggcccggttgtt
aagaaggttaatgtcagtcagatttatcctattctgggagcggcaacgaagaatgatctc
attaaggtgcgcgatgtttggactgatttgatgaatattttgagtgtgacgcagcgggcc
ctaatgcacgtggcccaaccagttgcggccagttcagaaggtgttgtggttgcgtttgac
tatgcgtttgtttatcaaaaagcgattgatgaccagaccttgatcgatgcactcggaaat
ggtttggatcggctgatgggacaggcacccaagattgtctgtgtgcctaaagaacagtgg
ccacaaattcgtaaggattatttggccactcaccagccaggaggtgcaacatcagagcaa
caagcaccggccaaagaaccggtcgttgaagaagctaagaacatgttcggtgatttagtt
gaagtacagccggactaa
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