Lactiplantibacillus plantarum ST-III: LPST_C0601
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Entry
LPST_C0601 CDS
T01324
Symbol
uvrA
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPST_C0601 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C0601 (uvrA)
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPST_C0601 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPST_C0601 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
RsgA_GTPase
AAA_21
AAA_25
nSTAND3
AAA_22
AAA_33
DnaJ_CXXCXGXG
AAA_18
SLFN-g3_helicase
Viral_helicase1
AAA_14
NACHT
cobW
RNA_helicase
Mtrc-MtrF_II-IV_dom
NTPase_1
NB-ARC
RNA12
T2SSE
Septin
Motif
Other DBs
NCBI-ProteinID:
ADN97823
LinkDB
All DBs
Position
641684..644539
Genome browser
AA seq
951 aa
AA seq
DB search
MANDKIVIHGARAHNLKDIDVTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMQKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGEP
ICPNDGTPIASQTVEQMVDRIQKLPERTKLQILSPIVRQKKGEHKKIFEKIKREGFVRVR
VDGDIHDISETFELNKNQQHTIEIVIDRIVVKSGDRSRLFDSFEAALRLSGGYAIADVIG
GEPIMFSEHYACPICGFTVGELEPRLFSFNAPQGACPDCEGLGIKLEVDEDLVVPDKSLT
LAEGALAPWNPISSQYYPEMLKQACEQLEIPMDVPYEDLSKADQQTVLYGSNGKTFHFHY
QNDFGGVRDVDAVFEGVINNVDRRYHETNSDFTRDVMRKYMTELTCQTCHGFRLNRKALS
VKVGGEHIGMVSDLAIGKELDFFNELSLSEQSLVIAKPILKEIRDRLSFLQNVGLAYLTL
SRSARTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNT
LIVVEHDEDTMRAADYIVDIGPGAGENGGEVMAAGTPKQVARSRKSLTGQYLSGKRFIPL
PETRRPGNGKKIRITGAAENNLKQIDVDFPLGEFVVVTGVSGSGKSTLVNDVLKRVLAQK
LNRNSEKPGKYKSVSGIKNIERLVNIDQSPIGRTPRSNPATYTGVFDNIRDLFAQTNEAK
LRGYKKGRFSFNTKGGRCEACHGDGILKIEMNFLPDVFVPCEVCHGKQYNSETLEVEYKG
KNIADVLQMTASEAVKFFEPIPKIRRKLQTLVDVGLGYVKLGQPATTLSGGEAQRMKLAS
ELHKQQSGKNFYILDEPTTGLHSEDIRRLIGVLDRLVDAGNTVLIIEHNLDVVKSADYLI
DLGPEGGDGGGTIVATGTPEQVAEVAESYTGQYLKPVLERDRAREATAPAK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatgataagattgtcattcacggtgcgcgagcccataatttaaaagatatcgac
gttaccatcccgcgcgacaaattagtcgtgattacggggttgtctggctcaggtaagagt
tcgttagcgttcgataccttgtacgcggaaggacaacgtcgctacgtggaaagtttgtca
gcgtacgcgcgtcaattcttaggacagatgcaaaaaccagacgttgattcaattgatggg
cttagtccggctatttcgatcgatcagaaaacaacatccaaaaacccgcgctcaacggtc
ggaaccgttacagaaatcaatgattacttacggttactgtgggcccgagtcggtgaaccg
atttgcccgaacgatgggacaccgattgcgagtcaaaccgttgaacagatggttgatcgg
attcagaaattaccggaacgaacgaagttgcagattttatcaccaattgtccgccagaaa
aagggcgagcacaaaaagatctttgaaaagatcaagcgtgaaggtttcgtgcgggtccgt
gttgatggtgatattcatgatatcagtgaaacttttgaactgaacaagaatcaacaacac
acgattgaaatcgtcattgatcggatcgttgtgaagtcaggtgaccgttctcggttattt
gattcttttgaagcggcgttgcgattaagtgggggctatgcgattgcggatgtgatcggt
ggcgaacccattatgttctcagaacattatgcttgtcctatctgtgggtttactgtggga
gaacttgaaccacggttattctcgtttaacgcgcctcagggagcttgtccagactgtgaa
ggtctcggaatcaagctagaagtcgatgaggaccttgtcgtacctgataagtcgttgacg
ttggctgaaggtgcgttagcgccttggaatccaatcagttcacagtattatcctgaaatg
ttgaagcaagcttgtgaacagttagaaattccgatggatgtgccgtatgaagacttatca
aaagctgatcaacaaacggttttgtatgggtctaacggaaagacgttccatttccactac
cagaacgactttggtggtgttcgcgatgttgacgctgtgtttgagggcgttatcaacaat
gttgaccgccgctaccacgaaacgaatagtgatttcacccgcgatgtgatgcgaaagtat
atgacggaactcacttgtcagacttgtcatgggttccgcttaaatcgcaaggccctgtct
gtcaaagttggtggcgaacatatcgggatggtctctgacttagccattggtaaggaactc
gatttctttaacgagttgagcttatcagaacaaagtctcgtgattgctaaaccaatcttg
aaggaaatccgcgaccggttatcattcttgcaaaatgtgggactggcgtacttaacgctc
agccgttctgcacggacgctgtctggtggggaagcccagcgaatccggttagcaacacag
atcggatcgaacttgtccggcgtgctctatatcttggatgaaccatcaattggattgcat
cagcgggataacgaccgcttgattggttcacttaagaagatgcgcgatctggggaatacg
ttgatcgtggtcgaacatgatgaagacacgatgcgggccgctgactatatcgtggatatc
ggcccgggtgccggtgaaaacggtggtgaggtcatggcggccggaacgcccaagcaagtg
gctcgctcgcggaagtcactgaccggccaatatctatcgggcaaacggtttatcccacta
cctgaaactcggcgtccgggtaatggtaagaagattcgtatcactggtgcggccgaaaac
aacctcaagcaaattgacgttgattttccactaggcgaatttgtcgtggtaacgggggtt
tccggttctggtaagtcgaccttggttaacgatgttttgaaacgcgtattggcacagaag
ttgaatcgtaattctgaaaagcctggtaagtataagagtgtcagtggtattaagaatatt
gaacggttagttaatattgaccaaagtccaatcggccgaacaccacgcagtaatccggcc
acatatactggtgtctttgacaatattcgtgatttatttgcacaaacgaatgaagctaaa
ttacgtggttacaagaagggccgctttagttttaatactaagggtggtcgttgtgaggct
tgtcacggtgacgggattctaaaaattgaaatgaatttcttgcccgatgtctttgtacct
tgtgaagtgtgtcatggtaagcaatacaattctgaaacgctggaagttgaatacaaaggc
aaaaatattgccgatgttcttcaaatgaccgcttcagaagctgttaagttctttgaacca
attccaaagattcgacggaaactacagaccttggttgacgttggtttgggctatgttaag
ttaggccaacccgccacgaccttatcaggtggagaagcccaacggatgaagttagcttcc
gaattgcacaaacaacagtcggggaagaatttctacatcttggacgaaccaacgactggg
ttgcacagtgaagatattcggcgcttgattggtgtcttggatcggttggtggatgcgggt
aataccgtgttaatcatcgagcataatttggatgttgtgaagtcggcggattatttgatt
gatttgggcccagaaggcggtgacggcggcggaacaatcgttgctactgggacaccagaa
caggtcgctgaagtggctgaaagttatactggccaatacttgaagcccgttctagaacgg
gatcgagcacgtgaagcaactgcacctgctaaataa
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