Lactiplantibacillus plantarum ST-III: LPST_C0606
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Entry
LPST_C0606 CDS
T01324
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
lps
Lactiplantibacillus plantarum ST-III
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lps03019
]
LPST_C0606
Messenger RNA biogenesis [BR:
lps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPST_C0606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
SKI
Myosin_head
Peptidase_C48
Motif
Other DBs
NCBI-ProteinID:
ADN97828
LinkDB
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Position
648986..649870
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AA seq
294 aa
AA seq
DB search
MAESLQLVIISGMSGAGKTVAVQSFEDLGYFCIDNMPPALLPKFSELVEESGKIKKVALV
IDLRSRAFYDEIMDMLANLDNTDFVSTRILFLDASNEELVSRYKETRRSHPLAMEGRVMD
GVRKERELLAPLKDRASYVIDTSTLTPRELRESIFDKFETDQDETFHIEMLSFGFKYGLP
IDADIVMDVRFLPNPYYIPELKKLTGLDKPVADYVMQQPATEAFYQQFLSMLESIMPGYE
AEGKSSLTIAIGCTGGQHRSVALTQRIGEALAKHYKVHISHRDIEKRKETVNRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcattacaactagtaattatttctgggatgagcggtgccggtaagacggtt
gcggttcaaagctttgaagacctgggctatttttgcattgacaatatgccaccagcgtta
ttaccgaagttctcagaattagttgaggagtcgggtaaaataaagaaagtagcgttagtg
attgatttacgctcgcgggctttttacgacgaaattatggatatgttggctaacttagac
aacacggactttgtgtcgacccggattctgtttttagatgcttccaacgaagaattagtg
tcacgttataaagagacgcggcgttcccatccattagccatggaaggtcgcgtcatggat
ggcgtgcgcaaagaacgagaattattggcgccattgaaagatcgggcttcatacgtcatt
gatacgtcgacgttgacaccacgtgaattacgcgaatcgatttttgataaattcgaaacg
gatcaggatgagacttttcatattgaaatgctatcattcggttttaaatacggactcccg
attgatgcagatatcgttatggatgtgcgcttcttgcctaatccatactacattcctgaa
ttaaagaagctgacgggactagataaacctgtggcggattacgttatgcagcaaccagct
acggaagctttctaccagcagttcttgagtatgctggaaagcattatgcccggctatgaa
gccgagggcaagagtagtttgacaattgcgattggctgtacgggtggtcaacaccggtcc
gttgccttgacgcaacgtatcggtgaagcgctggctaagcactacaaggttcacatcagt
catcgtgatattgagaaacgaaaggaaactgttaatcgctcatga
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