Lactiplantibacillus plantarum ST-III: LPST_C0633
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Entry
LPST_C0633 CDS
T01324
Name
(GenBank) DNA-directed DNA polymerase III, epsilon chain (putative)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03030
DNA replication
lps03430
Mismatch repair
lps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPST_C0633
03430 Mismatch repair
LPST_C0633
03440 Homologous recombination
LPST_C0633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lps03032
]
LPST_C0633
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C0633
Enzymes [BR:
lps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPST_C0633
DNA replication proteins [BR:
lps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPST_C0633
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPST_C0633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motilin_assoc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADN97855
LinkDB
All DBs
Position
complement(686230..686751)
Genome browser
AA seq
173 aa
AA seq
DB search
MDFETANAKRDSACSLALTVVRNNQISDEFYTLIKPESDFFWRNVQIHGIHEADVADAPK
FPDVWQHIEPFFQRDRLVIAHNAPFDIGVLRNTLAHYGISAPEYLSMDTVNTSQRFYPEL
PNHKLDTVCQALDIDLQHHHNALDDSLACANILLTEAQAFGTEQLKPFVRVQG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggactttgaaacggcgaacgcgaaacgcgacagtgcttgttcactggcgctaacggtt
gtccgtaataaccaaatcagcgatgaattttacacactcatcaaaccagagagcgatttt
ttctggcggaacgtccaaattcatgggattcatgaagcagatgttgcagacgcacccaag
tttccagacgtttggcaacacattgaaccattcttccaacgcgaccgcctcgtaattgcg
cacaacgcgccttttgatattggtgtgttacgcaatacgcttgcccactacggcatcagc
gcgccggagtacctatccatggacaccgtcaataccagtcaacggttctatccagaattg
cctaatcacaagctggatacagtctgtcaagcactggatatcgacctgcagcatcatcat
aatgcactagatgacagcctagcttgcgccaacattttactcaccgaagcgcaagctttt
ggaactgagcaactcaaacctttcgttcgcgttcagggttaa
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