Lactiplantibacillus plantarum ST-III: LPST_C1222
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Entry
LPST_C1222 CDS
T01324
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lps
Lactiplantibacillus plantarum ST-III
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C1222 (sbcD)
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPST_C1222 (sbcD)
Archaeal homologous recombinant proteins
LPST_C1222 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADN98441
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All DBs
Position
complement(1351059..1352240)
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AA seq
393 aa
AA seq
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MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV
TSLDHMLQAINIEHHLPIYAIAGNHDGAKRLNYGREWLAYNNFHINTLLAEAFTPIETPT
AQIFMLPFFDPIDARVYYQQQGLPEKQVKAIHTIHDAMQRVVSDLVTTFDPEKRHLLITH
FTVTPKADDDLELTSETTSKVGGLATLTTDLFADFDYVMLGHIHTRLASPDKDRIRYAGS
PVKFNVKEANPKFHGKGVEIVTITPTAITHEFKPIQPQTDLVTLRAPWETLLDPNFYQQQ
PLKQAWFAITVQEFDRSKHLNVRAQLEQIYGTIVELDYESNHQATAISGPKNMNELSPDA
IVGQFFHAITGNQLSTTQQQLVDQIFVNLRKED
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagttactacatacagcggattggcacatcggccggacgcttaacggttattctttg
ttagatgaacaggaagcagcgttcaagcaaattctaacgattgcattggctgaaaaagtt
gatggtatcgtgattgctggggacatctacgaccgggccgttccgagtaccgatgcggtc
acttcactcgaccacatgctgcaggctattaatatcgagcatcacctaccaatctatgcc
attgctggcaaccatgatggcgccaaacgtctcaactacggtcgtgaatggctagcctat
aataattttcatatcaatacgttactagccgaggccttcacgcccatcgagaccccaacg
gcacaaatctttatgttaccgttttttgaccccattgacgcgcgggtctactatcagcaa
caaggtttgcccgaaaaacaagtcaaggcgattcacaccattcacgatgcgatgcaacgc
gtggttagtgacctcgttaccacctttgatcctgaaaaacggcacttgttgattactcat
tttaccgttacacccaaagcagatgacgacttggaattaacaagtgaaacaacttccaaa
gtgggcggtttggcgacgctgaccaccgatttattcgcagacttcgactacgtgatgctg
ggccatattcacactcggttagcctcacccgacaaagatcgaattcgttatgccggtagc
cccgtcaaatttaacgtcaaggaagccaaccctaagttccatggcaaaggtgttgaaatt
gtgacaatcacacccactgcgatcacccatgaattcaagccaattcagccgcaaactgac
ttggttacgttgcgtgcgccttgggaaacgttacttgatcccaacttttatcagcaacag
ccgttaaagcaggcttggtttgcgatcaccgtccaggaattcgaccgtagtaagcatctg
aacgtccgggcgcaactcgaacaaatctacggcacaattgtcgaactggactacgaatcg
aaccaccaagccaccgccattagtggcccaaaaaacatgaacgaactgagtcctgatgcc
attgttgggcaatttttccacgcgattactggtaaccagctctcaacgacacaacaacaa
ctcgttgaccagattttcgtcaacttaagaaaagaggattag
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