Lactiplantibacillus plantarum ST-III: LPST_C1525
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Entry
LPST_C1525 CDS
T01324
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03030
DNA replication
lps03430
Mismatch repair
lps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPST_C1525 (dnaE)
03430 Mismatch repair
LPST_C1525 (dnaE)
03440 Homologous recombination
LPST_C1525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lps03032
]
LPST_C1525 (dnaE)
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C1525 (dnaE)
Enzymes [BR:
lps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPST_C1525 (dnaE)
DNA replication proteins [BR:
lps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPST_C1525 (dnaE)
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPST_C1525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADN98741
LinkDB
All DBs
Position
complement(1651632..1654982)
Genome browser
AA seq
1116 aa
AA seq
DB search
MAQYVPLQVLSTFSLLHSTSTVSELVQTAKQQGYSALALTDVDIMYGIVDFYNACRQAEI
NPILGITLNLLGRELTAQTFSLVVLAKDQAGYQNLMQLSTMKQTATDAGLSLTAVLPYLN
HLMVLTPAKDSELAALLLQNTAERAADWITTLRQAVDSASLYLGISLDQAPALRTTMTAF
AQQHQLPVVALDPVDYVQAKDYFAVSVLRAIDRGQQIEQPESLQGIEGSHYLRPANTVTA
DYEQLGLTTAVAATAEIAAQCQVELQFQQPQLPQFPTPAGQPANVYLRQLCTAGLTERLA
AITPSVDQQAYQDRLDHELTVIDQMGFDDYFLIVWDVMNFAHEAQITTGPGRGSAAGSLV
AYALNITDVDPLKYDLLFERFLNAKRANMPDIDLDIPDNRREQVLNYVHDKYGHDRVAQI
ITFGTLAAKQALRDVGRVFGLSTYEMSDWSAAIPNQLHITLDQAYQGSQRLQNLVADSSK
NKLLFETARRLEGLPRHYSTHAAGVVLSQKPLIQIVPLQAGSETMMMTQYTKDTVEAVGL
LKMDFLGLRNLSLMASALHYVQRQTGKPLAITKIDLNDPATLKLFQAGDTTGVFQFESAG
IRNVLRRLHPDNFELVAAVNALYRPGPMENIDHFIARKQGQEPVSYPAEQLAPILGPTYG
ILVYQEQVMQVAAVMGGFTLGEADLLRRAMSKKKRAVIDKMRQQFIAGAQQNGYSEAVAT
QVYQYIEQFANYGFNRSHAIAYSKMAFELAYLKVHYSGAFFTSLMNSVLGNGTKLKQYLA
EARQHQVAIIPPDINRSGQYFDWNGQAIVFGLSSIKGLRRDFIASVLDERQANGPFKSLQ
QFMQRIDAKWLKADLMDALIYAGAFDHFGLNRAELLTSVPELMSSAELAGGSMSLFESLA
PKIKKQPELSLGERLAKEAEYLGVYVSGHPVETYDWLAQQRHTQLVSTLTSEQPAQILVY
ITKVRTIRTKRGQPMAFATGSDLSGEIDLTIFPNTYQRIQAELKPEAIVLITGKVEQQRD
LQVIVNTWQLAEQLPKPTGQLFLRLQPEQATATVQKEILRILSQYRGPNPVLIYSVAAHR
TVELNSQYWVAENPDLVGALTTLLGRDNVVMKNAIP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaatatgttccattgcaagtattgagtacttttagtttacttcacagcactagt
acagttagtgagctagtccaaactgccaagcaacaggggtattccgcgttggctttaaca
gacgttgatatcatgtacggtattgttgatttttataatgcctgtcgccaggcagaaatt
aacccgatattgggaataacattgaacttattaggacgtgaactaacggcgcaaacgttt
agtctggtcgtgcttgcgaaagatcaagctggctatcaaaacttgatgcagttgtcgacg
atgaagcagacggcgacggatgcaggattgtcgctaacagccgtattaccttatttgaac
catttaatggtcttaaccccggctaaagacagtgaactagctgcgctgttgttacaaaac
accgctgagcgagctgctgattggattaccacgctgaggcaggcggtcgactctgctagc
ctttacttagggatttctttggatcaggcccctgcattgcgaacaacaatgacggccttt
gcgcaacagcatcaattgccggtagttgcgttagatccagtcgactatgtccaagcaaag
gattactttgccgtttcagttttgcgagcaatcgatcggggccaacagatcgaacagccc
gaatcgttacaaggtatcgaaggcagtcactacttacggccggccaacaccgtaacggct
gactatgagcaactgggattgacgacggcggtggcggctacggccgaaattgcggcacag
tgtcaagttgaattacaatttcaacagccacagttgccgcaatttccaacgcccgctgga
caaccagcgaacgtttatttacggcagttatgcacggctggtctaacggagcgattggcg
gcaataacgccgtcggttgatcagcaggcttaccaggaccgtttggatcacgaactgacc
gtgatcgatcagatgggctttgatgattactttttgatcgtgtgggatgtcatgaatttt
gcgcatgaggcccagattacaactggacctgggcgaggttctgcagcaggctcattagtt
gcttatgcactcaatattacggatgtcgatcccttaaaatatgacttgctatttgaacgt
ttcttgaacgctaaacgggcgaatatgccagatattgacttggatattccagataatcgc
cgtgaacaggtccttaattatgttcatgataagtatggtcatgaccgcgtcgcacaaatc
attacgtttggtaccttggcagcaaagcaagcactgcgcgatgttggccgtgtgtttggc
ctctcaacttacgagatgagtgactggagtgccgcaatcccaaaccaattgcatattaca
cttgaccaggcctaccagggctcacaacggttacaaaacctcgttgctgattcatctaaa
aataaattattatttgaaacagctcgccgtttggaagggttgccacgacattactcaaca
cacgcggccggggtggtattaagccaaaaaccattaattcagatcgtaccgctacaagca
ggtagtgaaactatgatgatgacccagtatactaaggacactgttgaagcggttggtttg
ttaaagatggatttcttaggattacggaatttgtctttgatggcaagtgcgctacattat
gtgcagcgtcaaactggcaagccactggctattactaaaatcgatttgaacgatccagcg
accctgaaattatttcaggcgggcgacacgaccggagtcttccaatttgaatcggcggga
attcgaaacgtgttacggcgtctgcacccggataactttgaattggtcgccgcggtcaat
gcactttaccggccggggcccatggaaaatatcgaccattttattgcccgcaaacaaggc
caagaaccggtcagttatccggcggaacaacttgcgcccatcttaggaccaacgtacggt
attctggtctatcaagaacaagtcatgcaagtcgccgcggtcatgggtggttttacacta
ggtgaagccgacttattgcggcgggcgatgagcaagaaaaaacgtgctgtgattgataaa
atgcggcaacaatttatcgctggtgcacaacagaatggttattccgaagcagttgcgaca
caggtttatcaatatattgaacaatttgcgaactatggtttcaaccgctcacacgcgatt
gcctacagtaagatggcttttgaacttgcttacttgaaagtccattattccggagcgttc
tttacctcattgatgaattctgtgttgggcaatggaacgaagctgaaacagtatctagcg
gaagctcgtcagcaccaagtggcgattattcccccggatattaatcggagcggtcaatac
tttgattggaatggtcaagccattgtgtttggactcagctcaatcaaagggttgcgccgt
gactttattgcgagtgtgttagacgagcggcaggcgaacggaccgtttaaaagtcttcag
cagttcatgcaacggattgacgcgaagtggctcaaagccgatttgatggatgcactgatc
tatgcgggggcttttgaccactttggtttgaaccgtgcagagctactgaccagtgtgcct
gaattgatgtcaagtgccgagttagccggtggcagtatgagtttatttgaatcattagcc
cctaagatcaaaaaacagccggagctttcgttaggtgagcgattggccaaagaagcggag
tatcttggtgtgtacgtttcagggcaccctgtggaaacgtatgattggctcgcgcaacaa
cgacatacacaattagtcagcacgctcacgagtgaacaaccggcacaaatactggtctat
attactaaggtccgaacgattcggaccaaacgtggtcaaccaatggcattcgcaacggga
agtgatttgtccggcgaaattgacttgacgatttttcccaatacctatcaacggattcag
gcggaattgaaaccagaagcaatcgtgttaattactggtaaggtcgagcaacagcgggat
ttgcaagtgatcgtaaacacctggcagttggcggaacaattacccaaaccaaccggccaa
ctctttttgcggttgcaacctgagcaagcaacggcgactgtgcaaaaggaaattttaagg
atcttaagtcaatatcgaggtcctaatccagttctaatttactcggtagcagcacatcga
acggttgaactaaattcacagtattgggtcgcagaaaatccagatttggttggagcgctt
acaaccttattaggtcgcgataatgtggtgatgaagaacgctatcccttga
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