Lactiplantibacillus plantarum ST-III: LPST_C1889
Help
Entry
LPST_C1889 CDS
T01324
Symbol
rhe3
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lps03019
]
LPST_C1889 (rhe3)
03009 Ribosome biogenesis [BR:
lps03009
]
LPST_C1889 (rhe3)
Enzymes [BR:
lps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPST_C1889 (rhe3)
Messenger RNA biogenesis [BR:
lps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPST_C1889 (rhe3)
Ribosome biogenesis [BR:
lps03009
]
Prokaryotic type
rRNA helicases
LPST_C1889 (rhe3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
ApbA
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ADN99105
LinkDB
All DBs
Position
complement(2027163..2028506)
Genome browser
AA seq
447 aa
AA seq
DB search
MTASFEDFKLQPFLMQALTDINFRKPTAVQEKLIPVIAAGRSVIGQSATGSGKTHTFLLP
MINQLNADERYVQAVITTPSRELAYQIQTAAKQLIQHSPKAIHIGLYVGGTDKQEQIEKL
NRHQPQLIIGTPGRILDLMRSQALDVHRATQLVVDEADMTLDLGFLNVVDQIAGRMPADL
QMLVFSATMPQKLTPFLRKYMNNPVMEEIPVESVISPTIDNWLISTKSHDKNSIIYRLLT
IGEPYLVLIFANTKERVQELTHYLRQQGLTIAMIHGDIQPRERKRVMRDVQQLKYQFVVA
TDLAARGIDIEGVSHVINDDIPNDLEFFIHRVGRTGRNGMAGTAITLYSPGEEAKVSAVE
AMGIKFKPKAIRDGEIVDSYDRNRRAKRGPKQEKLDPTLIGYVKKSKKKIKPGYKRRIRK
KISDKARMDRRIEQRAAARKERKDRKS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaagttttgaagattttaaattgcagccgttcttgatgcaggcactgactgac
atcaatttccgcaaaccgactgcggtacaggaaaagttgattccagtgattgctgctggc
cgcagcgtcatcggtcagtcagcaactgggagtggtaagacgcatacgtttttactgcca
atgatcaatcaactgaatgctgatgaacgttacgtgcaggcagttatcacaacgcccagc
cgtgaattagcttatcagattcagactgctgctaaacagttgatccaacacagcccgaaa
gccattcacattggactctatgtcggtgggactgataagcaggaacagattgaaaagcta
aatcggcaccaaccacagttgattattgggaccccaggacggattctggacttaatgcgc
tcccaggcactcgatgtgcatcgtgcgactcagctagtagttgatgaagccgatatgacg
ctagacttgggctttttgaacgtggttgaccagattgctggccgaatgcctgctgattta
caaatgttggtgttctcagccacgatgccacaaaaattaacgccatttttgcgcaagtac
atgaacaatccagttatggaagaaattccagtagaatctgtgattagtccgactattgat
aactggctaatttccaccaagagtcacgataaaaacagtattatttatcgcttgctgacg
attggtgaaccgtatctcgtgttgatttttgctaacacgaaggaacgagttcaagagttg
acccattatttgcgccaacaaggtttaacgatcgcaatgatccatggagatattcaacca
cgtgaacgaaagcgggttatgcgcgacgtccaacaattgaagtatcaatttgttgttgcc
actgatctagctgcccgtgggattgatattgaaggtgtttcacacgtcatcaatgatgat
attccgaatgacttagaattcttcattcaccgtgttggccggaccggccggaatggaatg
gcggggactgcgattacgttatatagcccaggcgaagaagccaaggtcagtgcagttgaa
gcaatggggatcaagttcaaaccgaaggcgattcgtgatggtgagattgtggattcatat
gaccgtaatcgtcgggctaaacgggggccaaaacaggaaaaactggacccaaccttgatt
ggttacgtcaaaaagtccaagaaaaagatcaagccgggttacaaacgccgcattcgtaaa
aagatcagcgataaggcgcggatggaccgccgcatcgaacaacgagcggctgcccgcaag
gaacgcaaggatcgtaagtcttaa
DBGET
integrated database retrieval system
