Lactiplantibacillus plantarum ST-III: LPST_P0001
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Entry
LPST_P0001 CDS
T01324
Name
(GenBank) integrase
KO
K07482
transposase, IS30 family
Organism
lps
Lactiplantibacillus plantarum ST-III
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LPST_P0001
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_29
HTH_22
HTH_23
HTH_17
LZ_Tnp_IS481
HTH_Tnp_ISL3
HTH_28
HTH_50
Terminase_5
HTH_Tnp_1_2
HTH_36
HTH_40
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ADO00223
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Position
pST-III:25554..26477
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AA seq
307 aa
AA seq
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MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFER
KVSQRGRKSSLTKNLKHLIEEKIQVHKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDL
PDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVER
KSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERRTGTQVYF
AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDHQLVQINWYLNSRPLKCLNWHTPIEI
FLLNLRH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccactattttatcattccagaaccgtgttgtcattgaaacgcttcataatgaa
ggacgttccttgcgatacatcgctaactacttaggctttagtaagaccaccatctttaac
gaacttcaccggctaaatagtgagtaccaggctgggctagcgcaaactgactttgaacga
aaggttagtcaacgggggcggaagtcttcgctcactaaaaaccttaaacacttgatcgag
gaaaagattcaagtccataagtggtcccctgaacaagttgcccatgtggtggggattgcc
tacaagacggtctataactggattgatcaaggatggcttgatatacagttgcccgatttg
cctgatcatggaattcgtcgtcatcgtgctaaagaaaagcgtggtacgttcaatcacggc
cgctccattgaggagcggcctcataaagtcgaaactcgccaggaattcggccactttgaa
gctgataccgtactttctggtaaacgtaaaggtcaagctgtggctacttttgtggagcgt
aagagtcgcctgacaattgttaaacggctccatggtcgcgacagtcagtccatgactcaa
gccgtacttgaactagctagtcaacttcaagacaagctcaagacgcttaccgtagatcat
ggtaaagagttcgctaactatcagacaattgaacggcgaactggtacacaggtttatttt
gcacatgcctattcaccgcatgaaagaggcagtaatgagaaccgtaaccgagttttgcgg
cgctttattcccaaaggccaagccattgaagaactaagtgatcaccaactggttcaaatc
aactggtatttgaattcacggccacttaaatgtcttaattggcatacaccaatcgagatc
ttcttgcttaatttacgtcattaa
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