Leuconostoc pseudomesenteroides: FGL85_04675
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Entry
FGL85_04675 CDS
T06327
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lpse
Leuconostoc pseudomesenteroides
Brite
KEGG Orthology (KO) [BR:
lpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpse03009
]
FGL85_04675 (rlmD)
Enzymes [BR:
lpse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FGL85_04675 (rlmD)
Ribosome biogenesis [BR:
lpse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FGL85_04675 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
MTS
RrnaAD
N6_N4_Mtase
DOT1
PrmA
Motif
Other DBs
NCBI-ProteinID:
QEA41831
UniProt:
A0A5B8SZE7
LinkDB
All DBs
Position
927660..929051
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AA seq
463 aa
AA seq
DB search
MYEGRTIARTILPVKLGQEITAVVDDIRIDGMGIVHVTEHYPLYIADAIPNEKIRLCVTQ
VDKFSGYAKVIERIVSSDARQNNHRQYLIEAGTAPLVNLKYEAQLVLKQKQIQKLFAKQG
LTVTVAPTVGMRKPTYYRNKTIVPVKWQNEKLTSGFYRRGSHELVPMTDYFVNDQAIDQA
IVIVRDILEKYQISAFDPDTQQGAIRYIMVRRGYYSHELMVVLVSDVPTLPNESEIVNEI
HTQLPELKSLRLNYSPKREYVLLSPNNRTLWGEDAIHDTLLGYDFIIGPNSFYQVNPQMT
EILYDLAAQKAELQANDIVIDAYSGIGTIGISVANRVKKVIGVEVVPGAVADAQLNLVNN
QITNATYILADAPEQFKRWQQERLKPDVVFVDPPRRGLTAELIEATVDMGPNRFVYISCN
PVTLARDAVEIIRRGYHIDGSILPVDQFPQTSHVESITVFRKD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcagaactatcgcacgtacaattttaccggttaaattagggcaggaaata
acggcagttgtggatgacattcgtattgatggcatgggtattgttcacgtaaccgaacac
tatcctttatatattgctgatgctattcccaatgagaaaattcgtctatgtgtcacacag
gtggataaattttcgggttatgcaaaagtcattgagcggatagtatcttccgatgccaga
caaaataatcaccgtcaatacttgattgaagctggtacagcacctctggtcaatttaaaa
tatgaagcacaattggttttgaaacaaaagcaaattcaaaaattatttgccaaacaaggt
ctaacagtgactgttgcaccaactgttggaatgcgaaagccaacgtattaccgtaataag
acgattgtaccggtgaagtggcaaaatgaaaaattaaccagtggattttatcgccgtggt
agtcatgaattagtgcccatgacagattattttgtcaatgaccaagcaattgatcaagca
attgtaatcgttagagatattttggaaaaatatcaaatttcagcctttgatccagatacg
cagcaaggtgcaatccgttatattatggttcggagaggttattattcacatgaattaatg
gtggttttagtttctgacgtgccaactttgcctaatgaatcggaaattgttaatgaaata
cacacacaattacctgaattaaaaagcttgcgattaaattatagtccaaaacgtgagtat
gtgttgttgagtcctaataacaggactctatggggcgaagatgccattcatgatacgttg
ttagggtatgattttattattggtcctaattctttctatcaagttaacccgcaaatgact
gaaatattatacgatttagcagctcaaaaagctgaattacaagcgaatgatattgttatt
gatgcgtattcgggcattggcactattggtattagtgtggctaatcgtgttaaaaaggtg
attggtgttgaggttgtgcctggtgcggttgctgatgcacagttgaatttggttaataat
cagattaccaacgcgacatacattttagctgatgcgcctgagcagtttaaacgctggcaa
caagaaagattaaaaccggatgttgtatttgttgatccgcctcggcgtgggttaactgct
gaattaattgaagcaacagttgatatgggaccaaatcgatttgtatatattagttgcaat
cctgtaacacttgcgagagatgctgttgaaatcattcgacgaggttatcacattgatggc
tccatactaccagttgaccaatttccacaaacgtcccatgtggaaagcataactgtattt
cgaaaggattag
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