Leuconostoc pseudomesenteroides: FGL85_04690
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Entry
FGL85_04690 CDS
T06327
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpse
Leuconostoc pseudomesenteroides
Pathway
lpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGL85_04690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpse03019
]
FGL85_04690
03009 Ribosome biogenesis [BR:
lpse03009
]
FGL85_04690
Enzymes [BR:
lpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGL85_04690
Messenger RNA biogenesis [BR:
lpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGL85_04690
Ribosome biogenesis [BR:
lpse03009
]
Prokaryotic type
rRNA helicases
FGL85_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
UvrA_inter
Cas3-like_C_2
AAA_22
GRP
Motif
Other DBs
NCBI-ProteinID:
QEA41834
UniProt:
A0A5B8T0E5
LinkDB
All DBs
Position
931583..933133
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AA seq
516 aa
AA seq
DB search
MKFSELGLSQDILDAIKTHGYVEATPIQEKTIPLTLSGRDVIGQAQTGTGKTAAFGLPIL
EHIDLENKNIQALIVSPTRELAIQTAEELKKLGHDKHVDVQVVFGGADIRRQIQNLKSHP
QILVGTPGRLLDHINRKTVRLDHVRTLVLDEADEMLNMGFLDDIESIIDKTPAERQTLLF
SATMPPAIKRIGVKFMTNPEHIQIEAKELTTDLVDQYFVRMRENEKFDTMTRIFDVQAPK
LAIVFGRTKRRVEELARGLEARGYHAAGLHGDLTQQMRSRVLAQFKSHEINILVATDVAA
RGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRAGAKGVSVTFVAPNEMDYLRAVEDLTKK
RMTPLEPATLQQARVGKINNAAGEVAKLIQSTDVAEIQDQVNALTAQYSAEQLAAALLSS
AADLEKQNTPVEITRERPLPRRKGGGSRNGGGRRDGNRGGGYRGNRNRRGNGDRSNDRRG
TSERRFGDYKRRDGRSNESRRNSGGNRREFTVREKG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttagcgaattaggtttgtcacaagatattttagatgccattaaaacacatggt
tatgtcgaagcgacaccaatccaagaaaaaacaattccgttgacattatcaggacgtgat
gtcattggacaagcgcaaacgggaactggtaaaacagctgcttttggtttgccaattttg
gaacatattgatttagagaataaaaacattcaagctttgattgtttcaccaacacgtgaa
ttggcaatccaaacggcagaagaattaaaaaagcttggacatgataagcatgttgatgta
caagttgtgtttggtggcgctgacattcgccgtcaaattcaaaatttgaagtcacatcca
caaatacttgttggtacaccgggtcgtttgctagaccacattaaccgcaaaacagttaga
ttggatcacgttcgtacacttgttctagacgaagccgatgaaatgttgaacatgggattc
ttggatgatattgaatcaattattgataagacaccagccgagcgtcagacgttgttattc
tcagctacaatgccacctgctattaagcgtattggtgttaagttcatgactaacccagag
catattcaaattgaagctaaagaattgacaactgatttggttgatcaatactttgtacgg
atgcgtgaaaatgaaaaatttgatacgatgactcgtatttttgatgtgcaagcaccaaaa
ttggccattgtgtttggtcgcacaaagcgtcgcgtggaagaattagctcgtggtttagaa
gctcgtggttatcatgctgctggcttacatggtgatttaacgcaacaaatgcgttcacgt
gttttggctcagtttaaatcacatgaaatcaatattttggtggcaacagatgtcgcagct
cgtggccttgatgttaaggatgtttctcacgtctataacttcgatattccacaagatcct
gaaagttatgtgcaccgcattggccgtacgggccgcgcgggtgctaagggtgtatcagtg
acatttgtagcaccaaatgaaatggattatctacgtgcagttgaagatttgactaaaaaa
cgtatgacgcctctcgagcctgcaacattacaacaggctcgtgttggtaaaattaataat
gccgctggagaagtcgcaaagttaattcagtcaactgatgtcgcagaaattcaagatcaa
gttaatgctttgactgcacaatattctgctgaacaattagcggcagccttgttatctagt
gcagctgacttagaaaagcaaaacacaccagtagaaatcacacgcgaacgtccattacca
cgacgtaagggcggtggttcacgcaatggtggcggtcgccgtgatggtaatcgtggtggt
ggctatcgtggtaatcgcaatcgacgtggcaatggtgatcgtagtaatgatcgccgtggt
acaagtgaacgtcgctttggtgattacaagcgtcgtgatggtcgttcaaatgagagccgc
cgtaatagcggcgggaatcgccgagaatttaccgttcgtgaaaaaggctaa
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