Lactiplantibacillus plantarum ZJ316: zj316_0503
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Entry
zj316_0503 CDS
T02458
Name
(GenBank) DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Pathway
lpt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
zj316_0503
09124 Replication and repair
03420 Nucleotide excision repair
zj316_0503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpt03021
]
zj316_0503
03036 Chromosome and associated proteins [BR:
lpt03036
]
zj316_0503
03400 DNA repair and recombination proteins [BR:
lpt03400
]
zj316_0503
Enzymes [BR:
lpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
zj316_0503
Transcription machinery [BR:
lpt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
zj316_0503
Chromosome and associated proteins [BR:
lpt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
zj316_0503
DNA repair and recombination proteins [BR:
lpt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
zj316_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PhoH
nos_propeller_2
Motif
Other DBs
NCBI-ProteinID:
AGE38042
LinkDB
All DBs
Position
complement(537897..540266)
Genome browser
AA seq
789 aa
AA seq
DB search
MATRIGIRQLVEFVLRQGDLNEVKNSQNTALNGAKIHRQLQSSRGEDYDSEVYLKKIVTM
NDTDYIIAGRADGIQLNDDGALIEEIKTSDQVFEDLSTNTLTLYWGQIKVYGYLLLQEHP
DLEQVTLQLTYFQVINEKITKTQQILHRAELDAFFHDLITEYEYWLTLRADLRRQRNASI
EDLPFPFPAFRPGQHELAGAVYKTIRLQKRLFVEAPTGTGKTISTLFPAIKAMGEDVIER
LFYLTAKQSTRHVAEEAVTLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPYMIGYYD
RLKPALKDLLTHEDQITRSVIEQYARKHTVDPFEFSLDTSLFCDVIICDYNYLFDPLVYL
QRFFSERDDDNFFLIDEVHNLVSRSRDMYSAAVSDQPISALLKLAKPDKSQPSDDLQREL
KKVRRSFTRISKTLIDDQVTEQVLPDPPDKLLRTLRTFNEFVTDWLAQQKPGPLLDAVRD
YFFACLTFVKIGDLYDGSYQTRFVLDGHHLTIKELCLDPSDFLNRSLELGSGAVLFSATL
TPMAYYQRVLGGEANSLAYQLPSPFPPKHQAILVTQYVQTTYHEREHNVPRIIASLHAML
TAKHGNYLVFFPSYGYLLQIKTAFEAAYPDVATTAQASTMDATARQTFLNQFQSAPSQTL
LGFCVLGGIFSEGIDLRGDRLIGVAIVSVGLPGINPETNLIRDYYDHQNGLGFAYAYQLP
GMNNVLQAAGRLIRSAKDTGIVLLLDQRFASRRYTDLFPAHWQYYQTIQSVPQLEATIAN
FWHQMEVTH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaggattggaattcgacaattggtagaattcgtcttgcgacaaggcgattta
aatgaagtaaagaatagccagaacactgcattgaacggtgctaagattcatcgtcagctc
cagagtagtcgtggtgaagactatgatagcgaagtttacctgaaaaaaattgtgacgatg
aacgatactgattacattatcgcgggtcgggcagacgggattcagttaaatgatgatggg
gcgttgattgaagaaatcaaaacatccgatcaagtcttcgaggacttaagtaccaacacg
ttgacactttactgggggcagatcaaagtctacggttacctgttactgcaagaacatccc
gatcttgagcaggtcacgttgcagctgacctactttcaagtcatcaatgaaaaaatcacg
aagacccagcaaatccttcaccgggctgaactagacgcattcttccacgacttaattaca
gaatatgaatactggttgacattacgagccgatttacgacgacaacgaaacgcttctatt
gaagacttgccatttccgtttccagcttttcggccgggccaacatgaattggctggcgct
gtttataagacaattcggttgcaaaaacgcctctttgtcgaagcaccaactgggacgggg
aaaacgatctcaacgctatttccggctatcaaagcaatgggcgaagacgtgattgagcgc
ctcttttacctgaccgctaagcaaagtacgcgccacgttgctgaagaagcggtcacgcta
atgagtcatgacggactcaaactgaaaagcattacgctaactgccaaggatcagattcgg
tttcccgaggaacaagatgtacttccggaagataatccttatatgattggctactacgac
cgacttaaaccagcactcaaggatctgttgacccatgaagaccagattacccgttccgtg
attgaacagtatgctcgcaagcatactgtcgatccgtttgaattttcactcgacacgtcg
ctcttctgtgatgtgattatttgtgactacaactatctttttgacccattagtctattta
caacgattctttagcgaacgtgatgacgacaactttttccttatcgatgaagtccacaac
cttgttagtcgctcccgtgatatgtactctgcagccgttagtgaccagccaatcagtgcg
ttgctaaaattagccaagcccgataaaagtcagccaagtgacgacttacaacgcgaactc
aagaaagtccggcgtagttttacgcgcatcagtaaaaccttgattgatgaccaagtaacg
gaacaggtgctacctgatcccccggacaaattattacgcaccctcagaacatttaatgaa
tttgtgactgactggttggcgcaacaaaagccggggccactgctcgacgccgtccgtgac
tatttcttcgcctgtctgacctttgttaaaattggcgacctatatgatggcagctaccag
acgcgcttcgtccttgacggtcatcacttaacgatcaaggaactctgcctagatcccagt
gactttcttaatcggtcattagagctcggcagtggtgctgtcctattttctgcgacgctg
accccgatggcttactaccagcgggtgcttggcggtgaagccaacagtttggcctaccag
cttccatcaccatttccaccaaagcatcaggccattctcgtcacccagtacgtccagaca
acgtatcacgaacgcgaacataacgtgccccggattattgccagcttgcacgccatgttg
acggctaaacatggcaactacctcgtgttctttccgtcgtatggctatctgttgcagatc
aaaactgcctttgaagccgcctaccctgatgtggcaactaccgcccaagcctcgacgatg
gatgcaactgcccggcagacctttttgaaccagtttcagtcagcaccctcgcaaacctta
ctcggtttctgcgtactgggtggtatcttctccgaaggcattgacttacgtggcgaccgt
ttgattggagtcgctatcgtcagtgtcggtctgccgggtatcaaccctgaaacgaacttg
attcgtgactactacgaccatcaaaacggcttaggattcgcctacgcttaccaactgcca
ggcatgaacaacgtcttacaggctgctggacgcctgatccgcagtgccaaggacaccgga
atcgttctcttgttagaccaacgcttcgctagtcggcgctacacagatttatttccagca
cattggcagtactatcagacgatccaatcagtcccgcagctcgaagcaacgattgccaac
ttttggcaccaaatggaggtgactcattaa
DBGET
integrated database retrieval system
