Lactiplantibacillus plantarum ZJ316: zj316_0645
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Entry
zj316_0645 CDS
T02458
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Pathway
lpt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
zj316_0645 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpt03021
]
zj316_0645 (rpoE)
03400 DNA repair and recombination proteins [BR:
lpt03400
]
zj316_0645 (rpoE)
Transcription machinery [BR:
lpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
zj316_0645 (rpoE)
DNA repair and recombination proteins [BR:
lpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
zj316_0645 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
AGE38184
LinkDB
All DBs
Position
670878..671486
Genome browser
AA seq
202 aa
AA seq
DB search
MELKQFDGQKKSELSLIEVAHAILSQHGDVMAFADLTNAVQSYLGKSDEEIRERLSQFYT
DLNIDGSFISLGDNMWGLRAWYPFESIDEAVIHTDDDEDEDRPKRKKRKKVNAFLADAGD
DDDVIDYDDDDPEDDDNYDDDDDQDDDTDDSASSKYDELAGVDDTDDDVADETLPDGIEG
QLSELNDDDDDDDYDDEDDESK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttggaactaaaacaatttgatggacaaaaaaagtccgaattatctttaatcgaggttgct
cacgcgatcttatcacaacatggtgatgtgatggcttttgccgacttgaccaacgctgtg
caatcatatttaggtaaaagcgacgaagaaattcgggagcgtttatcacaattttatacc
gatcttaatatcgatggtagtttcatttcgctcggtgacaatatgtggggcctgcgtgca
tggtacccatttgaatccattgacgaagccgttattcatacggacgatgacgaagatgag
gatcggccaaagcgcaagaagcgtaagaaggttaacgccttcttggccgatgccggggat
gatgacgacgtgatcgattacgatgacgatgatcccgaagatgacgataactacgatgac
gatgatgatcaggacgacgatactgatgattcagcaagcagcaagtacgatgaacttgcg
ggtgttgatgacacagacgacgatgttgctgatgaaacgttgccagacggtatcgagggt
caattatcagagttaaatgatgacgatgatgatgacgactacgatgacgaagacgacgaa
tcgaaataa
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