Lactiplantibacillus plantarum ZJ316: zj316_1550
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Entry
zj316_1550 CDS
T02458
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpt03400
]
zj316_1550 (sbcC)
DNA repair and recombination proteins [BR:
lpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
zj316_1550 (sbcC)
Archaeal homologous recombinant proteins
zj316_1550 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
nSTAND3
RabGGT_insert
Motif
Other DBs
NCBI-ProteinID:
AGE39089
LinkDB
All DBs
Position
complement(1609644..1612829)
Genome browser
AA seq
1061 aa
AA seq
DB search
MKPVYLAMNYFGPHEHSIIDFSKLESTPIFLISGDTGAGKSTIFDAMTFALFGSTTNDGT
DGRAAKEMRSQFAPADQPTSVTFYFEQGNQLYKIARSPEQYLAKKKGSGLTKKNSTAKLA
VVDHVGGVEIESIATKPADVGPEITTILNLTADQFKKIILLPQNDFSEFLKSKTTDKEKI
LKKIFGTQLYSGFTAELKAEYQTASKTGDQFVADLRVALASATWNDAEQAQLQAVPDDQK
IPLLRAFVTTRQSAFDQAQQTTSKINRSVKAAETTYQQARDRQQQFDRLTQAQADYQTKV
EEQTPAITIAKQQLHALTWAQPLQATMQALTQQTRDQKQLTLDQQAAMDNVQQAQDDYRQ
AQAAVQQLHDQSEAKHQHQQRLEQLATLIPQAQRVESLIAQLAKLKPSVADLKATFEQHQ
TVIKTLTAKITTQQANLPSIDDLHATKDLLIKQREQFVDTLTPLDSQWRGAQQEQQRVTK
QLTDLRAQLARDEQNQHNAQVQFEQQRGQRQSLMIAQLQQELVDGQPCVVCGSTDHSQMP
VTTIVANEADLRQSMQAVDDAQNALAAANKQVEATQQRVEQAEKEVDQATQQVTTAQTQL
TSTYQQLIETNGLALKSPYDLTAVRAFFAEQLATITKKLEAAQRVVQAIEKYTAELEAQQ
KQAQQTELQLGEQRALLHNKIADLTVAQAAIGTDLQVTSADLLAEKAHLNQIVATYQQRL
EAAQATVQTSQLTLSNHQTKLDDLNDRLKTTQATRTQLEQTIAQALADPEAPTHDQTVLE
NWLEELANGRLTDLQVQIATYRQDKERLTTEIKQLQTALTNVERPNIAGIQAQLADLQAH
KDRALQSQTVAEQTLTDAQSCLEKVQQIMHQQGTFAKRFAEITSLYNIMTGKDGNDHKLK
LETYVVQNYLQRVLNYANDHFINLLSNNRYTFELAAEASDNRSDHGLDINVYDNETGNSR
SSNTLSGGETFIAALSIALSLSEVVQSSANGVQIDALFVDEGFGSLDDETLEKAMQALET
IGENRMVGVISHIESMKRTIGQQVLIKKMGDGRSTVRLISK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccgtttatttagccatgaactattttggcccccacgaacattcaattattgat
tttagcaagctagaaagtaccccgatttttctgattagtggtgatactggggccggtaaa
tcaactattttcgatgccatgacttttgccctctttggcagtacgacgaatgatgggacg
gatggtcgggcagccaaagagatgcgcagtcagttcgcccccgctgaccaaccgacaagc
gtcaccttctactttgagcaaggcaatcaactctataagattgcgcgctcccctgaacaa
tacttagctaagaaaaaaggatctggactgacaaaaaagaatagtacggccaaattagct
gtcgttgatcacgttggtggcgtggagattgagagcattgcaaccaagccggccgacgtt
ggtcccgagatcacgaccatcttgaatttgactgctgatcaatttaaaaaaatcattcta
ctcccccaaaatgacttctcggaattcttaaagtcaaaaacgactgacaaggaaaaaatt
cttaaaaagatttttggaacgcaactttattcaggctttactgcggaacttaaagcggag
tatcaaaccgccagcaagactggtgatcagtttgtcgccgatttgcgggtcgcactagcc
tcagcaacttggaatgatgcggaacaggctcaacttcaagcagttccggacgatcaaaaa
attccactactacgagcatttgttacgacgcgtcaaagtgcttttgaccaagcacagcaa
acgactagtaaaatcaatcggtctgttaaagcggccgaaacgacctaccagcaagcacgc
gatcgccaacaacaatttgaccggctcacacaggcgcaagctgattatcaaactaaagtt
gaagaacaaacaccggcaattaccatagccaagcaacagttgcacgcgttaacttgggcc
cagcccctacaagccaccatgcaagccctcactcaacaaacacgtgaccaaaagcaattg
acgcttgaccagcaagcagctatggataacgtgcaacaagcgcaggacgactatcgccaa
gcgcaagctgcagttcaacaattacatgaccaaagtgaagctaaacatcagcaccagcag
cgcttggaacaattggccacgttgattccacaagcgcaacgcgttgaaagtctcatcgca
cagctcgcaaagctcaagccgagtgtcgctgatctgaaggcgacttttgaacagcaccaa
accgtaataaagacattaacagccaaaatcaccacccaacaagcgaacttgccatctatt
gatgacttacacgccactaaagatttgctgattaaacaacgagaacagttcgtcgacacc
ctgacaccacttgatagtcaatggcgaggtgcgcaacaagaacagcagcgcgtcaccaag
caactgactgatttacgggcgcagcttgcccgcgatgaacagaatcagcacaatgcgcaa
gtccaatttgaacaacaacgtggtcaacgccaaagcttaatgattgcccaattacaacaa
gaactcgttgacggccagccctgcgtggtctgtggatcaaccgatcattcacagatgccg
gtcacaaccatcgttgcaaatgaagctgacttacgacaatccatgcaagccgttgacgac
gctcaaaacgcgctggcggcagccaacaagcaagtggaagcaactcaacaacgtgtcgaa
caggctgaaaaagaagttgaccaggctacgcagcaagtaaccaccgcccaaacgcaacta
acttcaacttaccaacagttgattgaaaccaacggactagcactaaagtcaccctacgat
ttgaccgcagtcagggcttttttcgctgagcaactcgccacaattacgaagaagcttgag
gcagcccaacgagtggttcaagctattgagaaatatactgctgaactggaagcacaacaa
aaacaggcccaacaaacggagttacagttaggcgaacaacgggccttattgcacaataaa
atagccgatttgacggtagcccaggcagccattggtacggacttacaagtcacaagcgct
gacctgctggccgaaaaagcgcatctcaatcagatcgtcgcgacctaccaacaacgccta
gaggccgcccaagccaccgttcaaaccagtcaacttactttatcaaatcatcaaactaag
ctcgatgatttaaacgaccggttgaagacaacacaggccacgcgcacgcagcttgagcaa
acaatcgcacaggccttagctgacccagaagcaccgactcatgaccaaactgtacttgaa
aattggttagaagaactcgccaatggtcgactgaccgacctgcaagtccaaattgccacc
tatcggcaagacaaggagcgtctgacaaccgaaatcaagcaactgcaaaccgccttaacg
aacgttgaacgaccgaatattgcgggcatccaagctcagctggccgacctgcaagctcat
aaggatcgagcactgcaatcccaaaccgtggcggaacaaaccttaaccgacgcgcaaagt
tgtctcgaaaaagtccaacaaatcatgcaccagcaaggcacatttgcaaagcggttcgcc
gaaattacaagcctgtataatatcatgactggtaaagatggcaacgatcacaagctcaag
ttagagacctacgttgtccaaaactacttgcaacgcgtcttaaactacgccaatgatcac
tttatcaacctgctttccaataaccgctacacatttgaactagctgccgaagcgagtgat
aaccgcagtgaccacggcctcgatatcaatgtttacgataatgagaccggcaactcgcgt
tcatctaacacgttgtccggtggtgaaaccttcattgctgctctgtcgattgcactctcg
ctcagtgaggtcgttcaatcttcggctaatggcgtccaaatcgacgcactatttgtcgac
gaaggcttcggctccctggatgatgaaactttggaaaaagcgatgcaggcactcgaaaca
attggtgaaaaccgaatggtcggtgttatcagtcacattgaatcaatgaaacgaacgatt
ggccaacaagttctcatcaaaaagatgggggatggccgcagtaccgtgcggttgatcagt
aaatag
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integrated database retrieval system
