Lactiplantibacillus plantarum ZJ316: zj316_1625
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Entry
zj316_1625 CDS
T02458
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpt03019
]
zj316_1625 (rnc)
03009 Ribosome biogenesis [BR:
lpt03009
]
zj316_1625 (rnc)
03036 Chromosome and associated proteins [BR:
lpt03036
]
zj316_1625 (rnc)
Enzymes [BR:
lpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
zj316_1625 (rnc)
Messenger RNA biogenesis [BR:
lpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
zj316_1625 (rnc)
Ribosome biogenesis [BR:
lpt03009
]
Eukaryotic type
90S particles
RNase
zj316_1625 (rnc)
Prokaryotic type
rRNA processing factors
zj316_1625 (rnc)
Chromosome and associated proteins [BR:
lpt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
zj316_1625 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF2500
Motif
Other DBs
NCBI-ProteinID:
AGE39164
LinkDB
All DBs
Position
1679978..1680673
Genome browser
AA seq
231 aa
AA seq
DB search
MITELAAMLKERFGIVFNDPDLLAEAFTQASYVNEHQDQQLKYYERVEFLGDAVLELVVS
EYLYKRYKDMPQGKLTRLRAAMVCEESFASFARECDFPQYIRLGKGEQKAHAWERDSLLC
DIFESFVGALYLDQGREPVLKFVHQVIFPKLDEGRFDGVFDYKTTLQEYLQRDGDVAIDY
QLIEQDGPANERSYEIAVLADGQKIGEGWGHSKKEAEQSAARQAYSQLQQK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgattacagaattagctgcaatgttgaaggaacggtttggcattgtgtttaacgatccc
gatttattggcggaggcgtttacacaagcctcgtatgtcaatgaacatcaggaccaacag
ttgaagtattacgaacgggtcgaatttttgggggatgccgtcttggagttagtggtgtcc
gaatatttatacaaacgttataaagacatgccccaaggtaagttgactcgtttacgggcc
gccatggtttgtgaagaaagttttgcaagctttgcccgtgaatgtgactttcctcagtac
atccggttaggcaagggcgaacaaaaagcgcatgcttgggaacgagattcacttttatgt
gatatttttgaatcatttgtcggggcattgtacctggatcaaggacgggaacctgttttg
aagttcgttcatcaagtaatttttcctaagctggatgagggtcgttttgatggcgttttt
gattataagacgaccttgcaagaatacttgcaacgggatggcgatgtcgcaatcgactat
caattaattgaacaagatggtccagccaatgagcggtcttatgagattgccgtacttgcc
gatggtcaaaaaatcggtgagggctgggggcattccaagaaggaagccgaacagagcgct
gctcggcaagcttattcacaattacagcaaaagtaa
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