Lactiplantibacillus plantarum ZJ316: zj316_1990
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Entry
zj316_1990 CDS
T02458
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpt03016
]
zj316_1990 (truB)
Enzymes [BR:
lpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
zj316_1990 (truB)
Transfer RNA biogenesis [BR:
lpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
zj316_1990 (truB)
Prokaryotic type
zj316_1990 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGE39529
LinkDB
All DBs
Position
complement(2035205..2036128)
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AA seq
307 aa
AA seq
DB search
MLNGILPLYKPRGMTSFDCVAKIRRLYQTRKVGHSGTLDPNVDGVLPICIGNATKVVQFL
VASGKEYQGSITLGFATTTEDLDGEEIARQAVTEPFTSDQVDAALAQMTGAITQIPPMFS
AVKVNGRRLYDYARSGETVERPERHVTISSFKQRQASTYDSATQTQTIYFTVACSKGTYV
RTLAVDIGKVLGVPAVMSDLTRLKSGGFTLDETVTFEEIASHVDAGTAGALLAPIDKALS
QYPRVTLTDEQWQRVKNGAFITAAEGQQTDPDANTMVALVYQNSLKCLYSYRPDEQRYKP
FKMFAVN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgggattctaccattatataaacctcgtgggatgacgagctttgactgtgtc
gctaaaatccgacgactctatcagacccgcaaagtaggtcattcagggacactggaccca
aatgtggatggcgttttaccgatttgtattgggaatgcgactaaagttgtgcaattttta
gtggcttctggcaaagaataccaagggagcattactctcggatttgcaacgactactgaa
gatttagatggtgaggagattgcgcgccaagcggtcacagagccgttcacaagtgaccaa
gttgatgctgcgctggcacagatgacgggggccattacgcaaattccaccgatgttttca
gcagtaaaagtaaatgggcggcgtttatatgactatgcgcgcagtggtgaaactgtcgag
cgcccagaacggcatgtcacaattagcagcttcaagcaacggcaggcatctacctatgac
tcggcaacccagactcagacgatctattttacggtcgcttgtagtaaagggacttatgtt
cgcacgctagcggtggatatcggcaaagtgctcggggtacccgctgtgatgagtgatttg
acccgattaaagagtggcggctttactttagatgaaaccgtgacctttgaggaaatcgcg
tcccacgtcgatgctggaacggccggagcgttattggcgccaattgataaagctttaagt
cagtacccgcgagtcacgttaacggatgagcagtggcaacgggtcaagaatggggccttt
attacggcggcagaagggcaacaaactgatccagatgcgaacacgatggttgcgttagtt
taccaaaacagcctaaaatgtctatatagttatcgaccggacgaacagcggtacaagccg
ttcaaaatgtttgcggtcaattaa
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