Lactiplantibacillus plantarum ZJ316: zj316_2279
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Entry
zj316_2279 CDS
T02458
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lpt
Lactiplantibacillus plantarum ZJ316
Pathway
lpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
zj316_2279 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpt03019
]
zj316_2279 (rny)
Messenger RNA biogenesis [BR:
lpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
zj316_2279 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7262
Motif
Other DBs
NCBI-ProteinID:
AGE39818
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All DBs
Position
complement(2319614..2321173)
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AA seq
519 aa
AA seq
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MNVFGIILAVIAIVVGYGIGYYVRKNVHEKELDVARNTAEGIISEAKRAAETHKKEKVLE
AKEESHRYRAEVETELKQRRNEVQKQEDRLLQREETLDHKENTFEKREDALGKKEDKIAN
EQKRVEQQQQSAASLITQRQAELERVAALSQEQARDQILTQTREQLTHERAVLIKENTDE
VKAQSEKEAKNLIVQAIQQSAADMVSETTVSVVSLPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGYDPIRREIAKIALEKLIQDGRIHPARIEEMVEKARKEMDEKIRE
TGEQAVFDLGLHGMHPDLIKLVGRLNYRTSYGQNVLNHSIEVAKLAGVLAAELGEDVTLA
KRAGLLHDIGKAVDHEVEGSHVEIGVELTTKYKESPVVINTIASHHGDVEAKSIIAVLVA
TSDSISAARPGARSESLENYIHRLEKLEAIANNEDGVKKSYAIQAGREIRVIVKPNEISD
LQATVLAHDVKKQIENELEYPGHIKVTVIREVRAVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttcggtataatcctcgcagtcatcgcaattgttgtcggttatgggattggt
tactatgtacgcaagaacgtccatgaaaaagaattggacgttgccaggaacacagccgaa
ggtattatttctgaggccaaacgggcagcggagactcataagaaagaaaaagtccttgaa
gctaaggaagagagtcatcgctaccgggctgaagttgaaacggagttaaagcaacgtcgg
aatgaagttcaaaagcaagaagaccggttgcttcaacgtgaagaaactttagatcacaaa
gagaatacttttgaaaagcgcgaggatgctttaggtaaaaaagaagataagattgccaat
gagcaaaaacgcgttgaacaacagcaacaaagtgcagcttcactaatcacgcaacgtcaa
gctgagttagaacgggtcgccgccttgtcgcaagaacaagctcgcgatcagattttgacc
caaacgcgcgaacaattaacgcatgaacgggccgtgttaattaaagaaaatacggacgaa
gtgaaagcgcagtctgaaaaagaagccaaaaacttaattgtccaagcgattcagcaaagt
gctgccgatatggtttctgaaaccacggtttcggtcgtttctttgccgaatgacgacatg
aaaggccggattattggtcgggaaggtcgtaacatccgaacgttggaaacgctgacggga
attgatttaattattgatgacacgccagaagccgtcgttttaagtggttacgatccgatt
cgtcgtgaaatcgcaaagatcgcgcttgaaaagctgattcaagatgggcggattcatcca
gctcgaattgaagaaatggttgaaaaagcgcgtaaggaaatggacgaaaagatccgtgaa
actggtgaacaagctgtctttgatttaggattgcacgggatgcatcctgacttgatcaag
cttgttggtcggctgaattatcggaccagttatggtcaaaatgttttgaatcactcaatt
gaagttgcgaagttagcgggcgttttagccgctgaacttggtgaagatgttacactcgcg
aaacgcgcaggattattacacgatattggtaaggccgtcgatcatgaggtcgaaggttcc
cacgttgaaattggcgtggaattaacaacgaagtacaaagagagccccgtcgtgattaac
acgattgcctcccatcatggtgatgtggaagctaagtcgattatcgcggtgttggttgcg
acgtctgattcaatttcagccgcccggccaggtgctcggagtgagtcgctggagaattat
attcatcggctcgagaagctggaagcgatcgctaataatgaggatggcgtcaagaagagc
tatgcgattcaagctggtcgtgaaattcgagtcatcgttaagccaaacgagatttctgat
ttacaggcaacggttttggcgcacgatgtcaaaaagcagattgaaaatgaacttgaatat
cccggtcatattaaggttacggttattcgggaagttcgagcagtggattacgctaaataa
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