Limnobaculum parvum: HYN51_00210
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Entry
HYN51_00210 CDS
T05491
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpv03036
]
HYN51_00210
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_00210
Chromosome and associated proteins [BR:
lpv03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HYN51_00210
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN51_00210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
TetR_C_24
SpoIIIAH
IL15
BST2
DUF763
Motif
Other DBs
NCBI-ProteinID:
AWH87110
UniProt:
A0A2Y9TUB8
LinkDB
All DBs
Position
complement(1520329..1520736)
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKVLNNIRTLRAQARECSLETLEEMLEKMEVVVKERREEDQANQAEIQERTRKLQQ
YREMLIADGIDPNELLQSLSVAKVTGKSKRAARPAKYQFIDENGELKTWTGQGRTPAVIK
KAIEEQGKSLDDFLM
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaaagtccttaacaacatccgtactttgcgtgctcaggccagagag
tgctctcttgagactttagaagaaatgttagaaaaaatggaagtagtggtcaaagagcgc
cgcgaagaagatcaagcaaaccaagctgaaattcaagaacgtactcgtaaattacaacaa
tatcgtgaaatgttaattgctgacggtattgatccaaatgaattacttcaatctctttct
gtagcaaaagttacgggtaaatctaaacgtgctgcacgtcctgctaaatatcaatttatt
gatgaaaacggcgaattaaaaacctggacaggtcaaggccgtacaccagccgttatcaag
aaagctattgaagaacaaggtaaatcattagatgatttcctgatgtaa
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