KEGG   Limnobaculum parvum: HYN51_00815
Entry
HYN51_00815       CDS       T05491                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lpv  Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpv02044]
    HYN51_00815 (tssC)
Secretion system [BR:lpv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HYN51_00815 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SPX
Other DBs
NCBI-ProteinID: AWH87223
UniProt: A0A2Y9TW09
LinkDB
Position
1645338..1646876
AA seq 512 aa
MSTSTQGSSSKTASTVVKDAGSVYQSLFDKINLTPVAQFDDIVKFQDNDALAEASADERV
TMAVNVFLNMVQKSAQKVDKLDKSLLDFHISQIDKQLSEQLDAVMHHPEFQSIESAWRGL
KFLVDRTDFRRNVRIEVLDASKEALQQDFEDAPETIQTGFYRHTYIQEYDTPGGEPIGVT
ISNFEFDRGPQDIALLRNISKVAAAAHMPFIASVGPAFFGKNNMEEVAAIKDIANYFDRA
EYTKWKSFRDTDDSRYVGLTLPRVLARLPYGPDTVPVRNFNYTEEVKGPDHDRYLWTNAS
FAFAANMVKSFVRNGWCVQVRGPQAGGLVDDLPIHLYDLGTGNQVKIPTEVLIPETREFE
FANLGFIPLSFYKNRDYACFFSANSTQKPALYDTKEATANSRINARLPYIFLLSRIAHYL
KVIQRENIGATKDRRVLELELNAWINNLVTEMTDPSDEVQASHPLRQAKVTVEDIEDNPG
FFRVKTFLIPHFQIEGMDINLSMVSQMPKAKA
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtctacctctacacaaggttccagttctaaaacagccagcaccgtcgtaaaagacgcc
ggcagcgtctatcagtctctgttcgataaaattaatctcaccccggtggcgcaatttgac
gatatcgtcaagtttcaggacaacgatgcgttggcagaagcctcggcggacgaacgtgtc
accatggcggttaacgtctttctgaacatggttcagaaatcggcgcaaaaagtggataag
ctggacaagagcctgctggatttccatatcagccaaatcgacaaacagctgagcgagcag
ttagatgccgtcatgcatcacccagagttccagtctatcgagtctgcatggcgtggtttg
aagtttctggttgaccgcaccgatttccgccgcaacgtcagaatcgaagtgctggatgcg
tctaaagaagcgctacagcaagatttcgaagatgcgccagaaaccatccaaaccggtttc
taccgccatacctacattcaggaatatgacaccccgggcggcgagccgattggcgtaacc
atctctaactttgagtttgaccgtggcccgcaagatattgcattactgcgtaatatctct
aaagtcgcggcggcggcccacatgccgtttatcgcctccgtcggcccggcattctttggc
aagaacaacatggaagaagtggctgccattaaagacatcgccaactattttgaccgtgct
gaatacaccaagtggaaaagcttccgcgataccgacgattcccgctatgtgggtttaacc
ctgccgcgtgtgctagcgcgtctgccttatggtccagatacggtaccggtgcgtaacttc
aactataccgaagaggtaaaagggccggatcacgacagatatctgtggaccaacgcctca
tttgcgtttgccgccaatatggtaaaaagcttcgtgcgtaacggttggtgtgtccaagta
cgtggcccgcaagcgggtggtttggttgacgatctgccgatccacctatatgacctcggc
accggcaatcaggtgaagatcccaacggaagtactgatcccggaaacccgtgagtttgaa
tttgctaacttgggctttattcccctgtcattctataaaaaccgcgactacgcgtgtttc
ttctccgctaactctacccagaagccggcgctgtatgacaccaaagaagccaccgccaat
agccggatcaatgcccgtttaccgtacattttcctgctgtcgcgcattgcccattacctg
aaagtgattcagcgtgaaaacatcggtgccaccaaagaccgccgcgtactggaactagaa
ctgaacgcttggatcaataatctggtgacagaaatgaccgatccgagtgatgaagttcaa
gcatcgcacccgctgcgtcaggctaaagtgaccgtagaagatattgaggataacccgggc
ttcttccgcgtgaaaaccttccttattcctcacttccagattgaaggcatggacatcaat
ttatcgatggtttctcaaatgccaaaggctaaagcttaa

DBGET integrated database retrieval system