KEGG   Limnobaculum parvum: HYN51_00840
Entry
HYN51_00840       CDS       T05491                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
lpv  Limnobaculum parvum
Pathway
lpv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HYN51_00840 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpv02044]
    HYN51_00840 (clpV)
Secretion system [BR:lpv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HYN51_00840 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 Clp_N AAA_22 NBD_SMAX1 nSTAND3 nSTAND1 ATPase_2 NACHT AAA_14 AAA_25 TniB AAA_7 IstB_IS21 nSTAND6 AAA_24 Zeta_toxin Sigma54_activat DUF815 DUF6106 FecR_C
Other DBs
NCBI-ProteinID: AWH87228
UniProt: A0A2Y9TU60
LinkDB
Position
1651526..1654276
AA seq 916 aa
MITDPSVLLRRLNPYCAKALEAAASLCQTRAHPEITLEHWLLKLLEQGCGDMTVIARRYE
LDLDSVWQALLNQLETLPHTVQQKPVLSGVVQELLKSAWLIASLENQADSVRSAHILQAL
CDNPQWLKARDAWPLLSVSQVQLQRLLPILDELSDESPERVNAPTYESADFASADIAPTA
PGASTLNKTAPPPAQPTALDRFTINLTARAKEQKIDPVFGRDVEIRQMVDILSRRRKNNP
ILVGEPGVGKTALVEGLALRIAEGNVPDSLKSVNIHTLDLGLLQAGAGVKGEFEQRLKNV
IDAVQQSPTPILLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQY
FERDAALERRFQMVKVDEPDDDTAALMLRGLKSRYAQHHGVHILDEAVRTAVSLSRRYIT
GRQLPDKAVDLLDTASARVRMGLDTIPEEITLLEAQLSAREYEYIALSEDKELGEAIPES
RLDKIKVEQQGLIQQIEQRTVQFTNEKQIIEQLIELRSWLNQTDIPQTPQEITEQINQLQ
QQLYNVQDSVPLLSLDVDSRTVASVIADWTGVPLESLMKDEQSNLLTLESKLAERVIGQD
EALISLAQRLRAAKTGLTPEKGPLGVFLLVGPSGIGKTESALALADSLFGGERSLITINM
SEYQEAHTVSQLKGSPPGYVGYGQGGILTEAVRRRPYSVVLLDEVEKAHKDVINLFYQVF
DRGFMRDGEGREIDFRNTVILMTANLGSDYMMALLEEQPQATTAMLHEVIHPILRDHFQP
ALLARFQTVIYRPLGADALRKIVAIKMGNVAERLQRHYGIEFRVEESLFDELVSACLLPD
SGARNIDSLLNQQILPVLSQTLLQMQSQQKKAKALALGYREQEGITLDIIEHDTTAMTHS
APEAEITLGVYESEKE
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgatcaccgatccttccgtattactacgtcgattaaacccctattgcgccaaagcgtta
gaggctgctgccagcctgtgtcagacgcgcgcacatccagaaattactttagaacattgg
ttactgaaattgctggagcaagggtgcggcgatatgacggtgatcgctcgtcgctatgag
ctggatttggacagcgtatggcaagcactgctcaatcaactggaaactttaccccatacg
gtacagcagaaaccggtattatccggcgtggtacaagagctgttaaagtcagcctggctt
atcgcctcgctggaaaatcaagccgattccgtgcgttcagcccacattcttcaggcgctt
tgcgacaatccccaatggctgaaagcccgagacgcgtggcctttactcagcgtttctcag
gttcagcttcagcgtctattacccattctggacgaactctccgatgagagcccggaacgg
gtcaacgcacccacttacgagagcgctgactttgccagtgccgatatcgccccaactgca
ccgggtgccagcacattaaataaaacggcaccaccaccggcacagcctaccgcattagac
cgtttcaccatcaacctgactgccagagcaaaagaacaaaaaatcgatccggtatttggt
cgcgatgtggaaattcgtcagatggtggatatcttatcccgccgtcgtaaaaacaacccg
attttggtgggggaacccggcgtaggaaaaaccgcgctggtagaaggcttagccctgcgt
attgccgaaggcaacgtgccggacagcttaaaatcggtcaatattcatacgctggactta
ggtttgctacaggccggtgctggcgtgaaaggtgaatttgagcagcggctaaaaaacgtg
attgacgcggtacagcaatcgcccaccccaatcctgctgtttatcgatgaagcccatacc
attattggggcgggcaatcaggccgggggagccgatgcggctaacttgctgaaacccgcg
ctggctcggggggaactgcgtaccatcgccgccaccacttggtctgaatacaaacagtat
tttgagcgcgacgcggcattggaacgccgcttccaaatggtgaaagtggatgagccagac
gacgacaccgccgcgctgatgctgcgcggcctaaagtctcgctatgcacagcaccacggg
gttcatattttagatgaagcggtacgtaccgcagtttcactgtcgcgccgctatattacg
ggtcgtcagctaccggacaaagcggtggatttgctggataccgcatcagcccgagtgcgt
atggggttagatactattcccgaagagataacgctgctagaagcacagctttcagcacgg
gagtacgagtacatcgccctgagtgaagataaagaactgggggaagccatccccgagtca
cgtttggataagattaaagtcgagcagcaagggctgatccaacaaattgagcagcgcacc
gtacagtttactaacgaaaagcaaattattgagcaactgatagagctgcgctcttggctg
aaccaaacggatataccgcaaacgccgcaggagataaccgagcagattaaccaacttcag
caacagctttacaacgtacaggactcggtaccgctgttgtcgctggacgtagacagccgc
accgttgctagcgttatcgccgactggaccggggttccattagaaagcctgatgaaagat
gagcaaagcaacctgctgacgttggaaagcaaactggcagaaagagtcatcgggcaggat
gaagcgctgatatcgctggcccagcgtttacgggcggcaaaaaccggcctgaccccggag
aagggaccgttgggggtattcttactggtaggcccatcggggattggtaaaaccgaaagc
gcgctggcgctggcggatagcctgtttggtggtgaacgctcgctgatcaccatcaatatg
tctgaatatcaggaagcccatacggtttcccaactgaaaggctccccgcctggctatgtg
ggctacggacaggggggcatcctgaccgaagcggtacgccgtcgcccttacagcgtcgtg
ctgctggatgaagtagaaaaagcccataaggacgtcatcaatctgttttatcaggtcttt
gaccgaggctttatgcgcgacggtgaagggcgtgaaattgattttcgcaataccgttatt
ctgatgaccgccaacctcggcagcgactacatgatggcgttgctggaagagcaacctcag
gcgaccaccgccatgctgcatgaagtgattcatcctattctgcgcgaccacttccaaccg
gctttactggcccgtttccagaccgtgatttaccgcccgctgggggccgacgcgttaaga
aaaattgtggcgataaaaatgggcaacgtggcggaaagattacagcgccactacggcatt
gagtttcgggttgaagagagtttgtttgacgaactggtgagcgcctgtttattgccggac
agcggtgcccgcaatatcgatagcctgctgaatcagcaaattttgccggtactgtcacaa
accctgctgcaaatgcagtcacagcagaagaaagccaaagcgctggccttgggttaccgc
gagcaggaaggcattacgctggatattattgaacacgacacgaccgcaatgacacattct
gcaccggaagcagagataaccttgggcgtttacgagtcagaaaaggaataa

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