KEGG   Limnobaculum parvum: HYN51_01965
Entry
HYN51_01965       CDS       T05491                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
lpv  Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpv03400]
    HYN51_01965
DNA repair and recombination proteins [BR:lpv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HYN51_01965
    Archaeal homologous recombinant proteins
     HYN51_01965
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran nSTAND3 TsaE cobW
Other DBs
NCBI-ProteinID: AWH87432
UniProt: A0A2Y9TUY4
LinkDB
Position
1919198..1922878
AA seq 1226 aa
MRILSLRLKNINSLKDEWKIDFTQEPFCDNGLFAITGATGAGKTTLLDAICLALYHKTPR
LIVTPTQNELMTHHTAESLAEVEFEVQGVGYRAFWSQRRAKDAPDGNLQSPKVELAYIHD
GKIITDKIRDKLELTAQITGLDFSRFTKSMMLSQGEFAAFLNADPNERAELLEELTGTEI
YGHISEQVFLSHKEAKNQLDTLHTLLGSVQLLSEEQTQVLNQQSQQLQLQEKLQTQQTER
LLADKQWLEKREEYQRQESQCQHQFNLAQQNWQQQQPQLEKLQRSEPAEKLRPLHSNLIR
LHQERQDNQQEITRITQAEIELKQQLSVALRTREQAEQQHESQLKQHELTRTLINAQVIP
LDLQIGNRTSQLTQLESTRTHLILQRQQQQTEHGANLQQQRQLLSRQQALNDYFQHHPHH
QYWGENLLLWQQQLSQLTRINNDLQNAQQLADLKQKEIDELNQQLNEVTLSQERHLKQLQ
QLQQSFDKNDGAFQQLRTQHDLNGLKQQQHNLAQTRDRQQSLTLLFHRYQQVTKQYQVRS
TQLNELSVVIKQLDEERLTKRQQYSDKKIHLADLEKRAEQELIILRFEQERALLHPGSPC
PLCGSTQHPLVGENTSLNTSDTQQRLTQLKIEFQQLHDAGIELKSKVALHGEQQNQLTKE
MNNLSLEQDDINQQWQQHGKGLDVTLSLTEKKQFDDYLESVRQQEQQLQQQINLLEQAEQ
QWLQEKDLLNKQQNATQEAQQRVTLLAQNLLNKTQQQQQSEQGRLSLQQDYQMQSEQLQT
ALAHYELMLPPPEQYDSWYSTRKSEWQQWQNHLNDQKVLEQQLITLNTPIAALAARIESL
NSQAAENQTQLTACQQELEQLKQQRHQLFGDRQTDATMLQLQQQQHTLELAVTDSRNTWQ
QLNDRLTALNGQLSTLLSQQQQLEQKTDSAEHQFTAALQQSAFHHQAEFLDALLSPELHL
QLSELKEMLSNALHQAQALFNEANKQRQRHVAQRPESLTEESNIPHLSLQLAQLTEESKA
NGIRQGEIRQQLENDRQNRTNQQSVVERIALHQQQVDDWAYLNNLIGSSDGAKFRKFAQG
LTLDHLVYLANQQLNRLHGRYLLQRKESGALELQVVDTWQADNLRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDNLNASGKIIGVISHIDAMK
ERIPVQIRVRKVNGLGISKLDDRFKK
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgcgtattcttagcctgcggcttaaaaacattaactcgctgaaagacgagtggaaaatc
gatttcactcaagaacccttttgcgataatggtctgtttgccattactggcgcgaccggt
gccggtaaaaccaccctgttggatgctatttgcctagcgctttaccataaaacaccgcgc
ctaatcgtgacgccaacccagaatgaactgatgactcaccacaccgctgaatcgctggct
gaagttgagtttgaagttcagggggttggctatcgcgctttctggagccagcgccgggcg
aaagacgcgccggatggcaacctgcaatcccctaaagttgagctggcctatattcacgat
ggcaaaattattaccgataaaatacgcgataagctcgaacttacggcccagatcaccggt
ttagactttagccgtttcaccaaatccatgatgctatcgcagggcgagttcgccgcattc
cttaatgcagaccccaatgagcgtgcagaactactggaagagcttaccggtactgagatt
tatggtcatatttctgaacaagttttcctgtcccataaagaggcgaaaaaccagctggat
accctgcataccctattgggtagcgtacaattgctgtccgaagaacaaactcaagtgcta
aaccaacagtcacagcaactgcaattgcaggaaaaattgcagactcagcaaactgagcgc
ctgctggcggataagcaatggttggaaaaacgagaagaataccagcgccaagaatcacag
tgccagcaccagttcaatctggcccaacagaattggcaacagcaacaacctcaactggaa
aaattacagcgtagcgaaccggcagagaagctgcgtcctctacatagcaacctgatacgt
ttgcatcaggagcgtcaagataaccagcaggaaataacccgcatcactcaggccgaaatc
gaactcaagcagcagctatccgttgccttgagaacgcgtgaacaggcggaacaacagcac
gaatcacagctgaaacagcatgagttaacccgcaccctgattaacgctcaagtcataccg
ctggatttacagattggaaatagaaccagccaattaactcagttggaatcaacgcgaacc
catctcatcctgcaacggcaacaacagcaaaccgagcatggagccaacctccaacaacaa
cgccaactactcagccgtcagcaggccctgaatgactattttcaacatcatccacaccat
caatactggggagagaaccttctcctgtggcaacagcaattaagccagctaacccgcatt
aataacgatttacagaacgcacaacaattagcagatcttaagcaaaaagagattgatgaa
ctcaatcaacagttaaatgaagtgacattgtcacaagagcgtcatcttaagcaactacaa
caattacagcaaagctttgacaagaatgatggggccttccagcaactgcgaactcagcac
gatctgaatgggttaaaacaacagcagcataaccttgcccaaaccagagatcggcagcag
tcgctcaccctgctgtttcatcgctatcagcaggtcactaaacagtatcaggtacggtca
actcaactaaatgaactctcggtggtcattaaacagctcgatgaggagcgattaaccaaa
cgtcagcagtatagtgataaaaaaatacatctggctgacttagaaaaacgggctgaacaa
gagctgatcattctccgatttgaacaggaacgcgccctgttacaccccggttctccctgc
ccgttgtgtggttcgactcagcatccattagtgggtgagaatacctcattgaatacatcg
gatacccaacagcgcctgacccaattaaaaatcgaattccagcagttacacgatgccggt
attgagttaaaaagtaaggttgcactacacggcgagcaacaaaaccagctcactaaagag
atgaataacctgagccttgagcaagacgatatcaatcagcagtggcagcaacacggtaaa
gggctggatgtcacgctctcccttactgagaaaaaacagttcgatgattatctggaaagc
gtgcgccaacaagagcaacagttacaacaacagataaacctacttgagcaagccgagcag
caatggctacaagaaaaagatctactcaataaacagcagaatgcgactcaggaagcccaa
caacgggtgacactactggcacaaaacctgttaaacaaaactcagcaacagcaacagtct
gagcagggccgattgtcactacagcaagattatcaaatgcagtcagagcagttgcaaact
gccttggcccactatgaactgatgctaccaccaccagagcagtatgacagttggtatagc
acacgtaaaagtgaatggcagcagtggcaaaaccacctcaacgaccaaaaagtattggaa
cagcaattaatcaccctgaataccccgatagccgctctagcggctcgaatagagagtctg
aattcacaggcggcagaaaatcaaactcaacttaccgcttgccaacaggagttagagcag
ctcaagcagcagcgtcatcaactattcggcgatcggcaaacggatgcgacaatgttgcaa
cttcagcaacagcagcacactttagaactggcggtaaccgacagcagaaacacttggcaa
cagcttaacgatcgactaacggccctcaatggtcagctttccaccctgctatctcaacag
cagcagctagagcaaaaaaccgacagtgcggaacaccaatttaccgccgcgttacagcaa
agtgctttccaccatcaagctgagtttcttgacgccctgttatctccggaattgcacctc
cagctcagtgaacttaaagagatgctctccaacgcgctgcatcaggcacaagctctgttt
aatgaagccaataaacaacgacaacggcatgtggcccagcggccagaatcgctaaccgaa
gagagtaatattccgcacctcagcttacagctcgctcaattaactgaagagagtaaagct
aacggtattcgtcagggcgaaattcgccaacagttagaaaacgaccgacaaaaccgcacc
aatcagcagtcagtggtggagcgtattgcactgcatcaacagcaggttgatgattgggcc
tatctcaataatctgatcggctccagcgatggtgcaaagttccgtaaatttgctcagggc
ctcacgctggatcatttagtctacttggccaatcaacagctaaatcggctacatggccgt
tatctgctacagcgtaaagagagcggtgctcttgaactacaggttgtcgatacctggcag
gcagataacctgcgggatacccgaacactatccggtggggaaagttttctggtcagcttg
gcattggcgctggcgttatccgatttggtcagccataaaaccagcattgactctttgttt
cttgatgagggtttcggcactttagacgccgaaacgctggatatcgccctcgacgcactc
gataacctaaacgccagtggaaaaatcattggggttatcagccatatcgatgccatgaaa
gaacgaatcccggtgcaaattcgagtccgtaaagtgaatggattgggtatcagtaaattg
gatgatcggttcaagaaatag

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