Limnobaculum parvum: HYN51_03025
Help
Entry
HYN51_03025 CDS
T05491
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lpv
Limnobaculum parvum
Pathway
lpv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN51_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_03025
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN51_03025
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN51_03025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AWH87627
UniProt:
A0A2Y9TV91
LinkDB
All DBs
Position
complement(2156077..2158098)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKTFKLNSAFQPAGDQPEAIRRLTEGLEDGLAHQTLLGVTGSGKTFTIANVIAQLERPT
MILAPNKTLAAQLYGEMKAFFPENSVEYFVSYYDYYQPEAYVPSSDTFIEKDASINEHIE
QMRLSATKALLERRDVVLVASVSAIYGLGDPDAYLKMMLHLTRGMIIDQRSILQRLAELQ
YTRNDQVFQRSTFRVRGEVIDIFPAESDEYALRIELFDDEVERLSVFDPLTGQVQQVVPR
FTIYPKTHYVTPRERILEAIEGIKVELADRRRMLLANDKLVEEQRLSQRTQFDIEMMNEL
GYCSGIENYSRYLSGRGEGAPPPTLFDYLPADGLLVIDESHVTVPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEQLAPQTIYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRVEKNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRVTKSMAKAIDETERRRARQIAYNEANGIVPQGLNKSIEDILELG
QGLGTLKHAKGRGKKKAAESEADYTALTPQALDKKIRELEGKMYQHAQNLEFEEAAQLRD
VLQKLREQFIAIS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacattcaaattaaactcggcttttcagcccgccggcgatcaaccggaggct
attaggcggttgactgagggattggaagatggattagctcaccaaacgttacttggggta
accggatccggtaaaacgtttaccatcgccaacgtcattgcccagttggaaaggcctacc
atgattctggcaccgaataagacgctggccgctcagctgtatggggaaatgaaagccttc
tttcctgaaaattcggtggagtatttcgtctcttactatgattattatcagccagaagct
tatgttcccagctcggatactttcattgagaaagatgcctcgattaacgaacatattgaa
cagatgcgactgtcggcgaccaaagctttgttggagcgacgggatgtggttctggtggct
tcggtttccgccatttatggtctgggcgatcccgatgcctacctgaaaatgatgttgcac
ctgacgcgcggcatgatcatcgatcagcgttcgattttgcaacgattggccgaattgcaa
tatacccgcaacgatcaggtattccagcgcagtactttccgggtgcgcggtgaagtgatt
gatattttccctgcggagtcggacgagtatgccctgcgtattgaattgtttgatgatgaa
gtagaacgcctgtcggtttttgacccgctgaccggtcaggttcagcaggtggttccccgt
tttactatctatcctaaaacgcactatgtcacaccgcgtgaacgcattctggaagctatc
gaaggcatcaaggttgagctggccgatcgtcggcgaatgctactggccaatgataagctg
gtggaagagcagcgcttgagccaacgaacccagtttgatattgagatgatgaatgagctg
ggttattgctccggcatcgaaaactactcacgctatttgtcggggcgtggagaaggcgca
ccgccgccaaccctgttcgattacttaccggctgatggcctgttggtgattgatgagtcc
cacgtaaccgtgcctcaattaggtggtatgtatcgcggtgacagagcgcgtaaagagacg
ttggtagaatatggcttccgtttgccttcagcgttagacaaccgccccctgcgttttgaa
gagtttgagcaactggctccgcagactatttatgtgtccgccaccccaggaaattacgag
ctggagaaatccggtggagaaattatcgatcaggtggtacgtcctacggggctgttggac
ccactgattgaggtgcgccccgttgctactcaggtggatgacttactgtctgaaattcgt
attcgggtggagaagaatgagcgggtgttggtgactacgctaaccaaacggatggcggaa
gatttgactgagtatctggaagagcacggggagcgggtgcgctatctacactcagatatt
gataccgttgagcgagtagagattatccgcgatttgcgtctgggtgagtttgatgtactg
gtgggtatcaacctactacgtgaaggtctggatatgccagaggtgtcattagtggctatt
ctggatgcggataaagaagggttcctgcgttccgaacgttcactgattcagaccattggt
cgtgcggcacgtaatttaaacggcaaagcgattctctacggcgatagagtcactaagtcg
atggcaaaagccattgatgaaacagaacgtcgtagagcgcggcagatagcgtataacgag
gccaatggcattgttccgcaggggctgaataagtctatcgaggatattctggagctgggt
caggggctggggacactgaaacatgccaaaggccgtggtaagaagaaagcggcagagtca
gaggcagattacactgcactgacgccgcaggcgttagataaaaagattcgcgagctggaa
ggtaaaatgtatcaacatgcgcagaatcttgagtttgaagaggcggctcagttacgggat
gtattgcagaaactgcgggagcagtttattgcgatatcgtga
DBGET
integrated database retrieval system
