Limnobaculum parvum: HYN51_03980
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Entry
HYN51_03980 CDS
T05491
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lpv00536
]
HYN51_03980
Glycosaminoglycan binding proteins [BR:
lpv00536
]
Heparan sulfate / Heparin
Microbial pathogens
HYN51_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
PT-VENN
T4SS_pilin
Motif
Other DBs
NCBI-ProteinID:
AWH87793
UniProt:
A0A2Y9TVR9
LinkDB
All DBs
Position
complement(2346797..2351620)
Genome browser
AA seq
1607 aa
AA seq
DB search
MTFSYSIERVNIQLPGENGMKDVSVVTRPPSLNLILPNASLYKINPAVGSRYLIETDPQY
TQLKRWLGSDYMTSRLQADPNNMHKRLGDGYYEQRLISDQIINLTGQRFLNGYANDEEQY
MALMNSGVEFAQKYPLSLGIALTPEQMANLTSDIVWLVSRDVTLPDGSIQTVLVPQVYAM
IRPQDIDGSGALLAGKQVNLQLTGDLVNQGRILAGDKLNVLAQNIQNMGGSISGNNVMLL
ANNDINNIGGLMQGFDSLRLQAGHDINLITTTTQGEKAGRNGSSHTAINQVAALAVNHDN
GTLQLSAGHDINLTAALLSNAGQNSDTSIAAGHDLNLNTVTVAKQAEFYKDKNNYRREST
SSEVGSQMTGSGDITLSAKNDINARAAQVEAGGQLGVIAGNNLSMTTGESTEDLSEHSKY
SSRGSFGKKLTSESHDELHAVSGVSSNFSGDSVVMKAGNDLLVHGSQVTGIHDVSLSAGN
DLTIDTAAEKRDEMHLSRTTKSGLMGTGGIGFTVGKIDEKFTNTTHGIGNLGSIVGSTEG
NVTLSAGNHLAIKGSDVVAQQDISLTGKNVTVESVENQTHIQDKYERTQSGVTVALSGAV
GGALNAAVTEAKQAQETHDSKIKALQEIKAALSAAQAVQAGMMDLPKDSEGFVGISISGG
AQRTESTTDTNIRAAQGSTIAAGNNLSITATGNGEKGVDGDITLKGSAINAGNNMLLDAN
RDVNLLAAANTQKTDSENKSYGGNAGVSFGIGGGKNGLRFFADANFSQGNMHADGLYWTE
SQLEAGNNLTIISGRDTNLIGALAKGDSVTMDVGRDLTVRSLQDTDDYSYEQYSLNIAGS
YGTGFDGSLGFTMDKMDSTWASVNEQSGIYAGKGGYDITVGKHTQLDGAVIASEATADKN
NLDTGTLGWSDIKNKADYDVSHVSMSIGSGGGAPFGFPGVPGTPIVVAYGDSASSTTHAA
IADGTLTIRDQSNQQQDIAKLSNDTANAANPLDKIFDADEQMRNLEAIGLAGQIVSQVTT
IATNIGVKAAQDEAHAKADAQKDSAANDPAIIAQARADLSKAGNDNPTQEELNKATYDVV
YQAEFKIANEKQMKEYGTGSDVQRAIQAAGAALTVAMGGGSVGNAAAAASAPYLAQGVKV
LTEGPEMKDKAINAIAHAIIGAAVAQGSGNSAASGAIGAASGEIIAQTITQYLYEGRKPE
ELTEEQRQAVAALSMIASGAIGGVVGDSTESAATSANAGYNAAVNNFLSPEKAETLIKSI
EDQKAGKNLVEASLNIVKLTNEDRASNVLLELYQSGQPMTESQKQELAGLLDQYGYELQV
MYGFTPQKANEAIQGVLAGKAFVASTGDISAYNEALSYLKTASVHTSQAIMGTDALMALP
GAPGIVARSALAAGGAYQAGYGLGQLSDGNYGEGAWNVGLGTAAIFGGVAGNSVISRTDR
AIASPGKAVSWQESSLFPNSKADTSPLSIQAQKDLLDEINKFRSRTQATNTSTMIGAYDS
ATGKTAIGFSNNNITAELLDSKTVTYIESQLGAKIGEFTSFCKNTVGACAEVSAADQLIR
QGADPASIKFTRAVRPRDAYGKKEVPAKAIVDTCENCAATWPNGNKK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
ttgacgttcagttacagtattgaacgggtaaacattcaactgccgggtgagaacggtatg
aaggacgtcagcgtggtgacccgcccaccgagcctgaatctgatattacccaatgccagt
ctgtataaaatcaatccggcggtaggtagtcgctatttaatcgaaaccgaccctcaatat
acccaacttaagcgctggctgggttcggactatatgaccagccgcttacaggctgacccg
aacaatatgcacaaacgtctgggggatggttactatgagcagcgactgattagcgaccag
ataattaacctaaccggacagcgctttttaaacggctacgccaatgacgaagagcaatat
atggcgctgatgaacagcggcgtggagtttgctcagaagtatcctctgtcattaggtatt
gcgctgacgccagagcagatggctaacctgacttcagacatcgtctggctggtcagccgt
gacgtgaccttaccggatggcagtatccaaacggttctggtgccgcaggtgtatgccatg
attaggccgcaggatattgacggcagcggtgcgcttttggccggtaagcaggtcaatttg
caactgaccggtgatttggtcaatcaggggcgcattctggcgggggataagctgaatgtg
ctggcgcagaatattcaaaatatgggcggtagcatcagcggcaataatgtgatgttgctg
gcgaataacgatattaataatatcggcgggttgatgcagggctttgacagcctgaggctt
caggccgggcatgatattaatctcatcaccaccaccacgcagggagaaaaggcgggtcgc
aatggctcttcccatacggctatcaatcaggtggcagcccttgcggttaatcacgacaac
ggcacattacagctttcggcgggtcacgatattaatctgacggcggcgctgctgagcaac
gcgggtcagaacagtgatacgagcattgcggcgggtcacgacctgaatctgaatacggtg
acagtagcgaaacaggcggagttttataaagacaaaaacaactaccgtcgggaatcgact
tcgtcagaggtgggcagtcaaatgaccggcagcggcgatatcaccctgtcagcgaaaaat
gacatcaatgcccgagcagcgcaggtggaggccggtggtcaactcggggtcattgcggga
aataatctgtcgatgactaccggtgagtcaacggaagacctgagcgaacattcaaagtac
agtagccggggaagttttggcaaaaaacttacgtcagaaagccatgatgagctgcatgct
gtttcgggggtcagcagcaactttagcggtgactcggtggtgatgaaggccggaaacgac
ctgttggttcacggaagtcaggttactggaattcatgatgtttcgctcagtgccggaaat
gacctgactatcgataccgccgcggaaaaacgggatgagatgcatctgtcccgcaccacc
aaatcgggcctgatgggcactgggggtattggctttaccgttggtaaaatagatgaaaaa
ttcaccaacacgacgcacggtattggcaatcttggcagtattgtcggcagtaccgaaggc
aacgtcaccttaagcgcgggcaatcatctcgcgatcaaaggctcagacgttgtcgcccag
caagacatcagcctgacgggtaaaaacgtcaccgttgagtcagtggaaaaccagacccac
attcaggacaagtacgaacgtacccagtcgggcgtgaccgttgcgctgtctggtgcggtg
ggtggtgcactgaatgcggcggtgaccgaagcgaaacaggcgcaggaaactcacgacagc
aaaatcaaggcgctacaggaaatcaaagcggcgctgtcggcggcgcaggccgtacaggcc
gggatgatggacttgcccaaagacagcgaagggtttgtgggtatcagtatttcgggcggt
gctcaacgtactgaatccaccactgacaccaatatacgggcggcgcagggttcaaccatt
gcggcggggaataatctgtcgattaccgccaccggtaacggtgagaaaggggtggatggc
gatatcacccttaaaggctccgccatcaatgcggggaataatatgctgcttgacgccaac
cgggacgttaacctgctggcggcggcgaacacccagaaaaccgacagtgagaacaagagc
tacggcggtaacgccggggtcagttttggtattggcgggggtaaaaacggcctgcgcttc
tttgcggatgccaacttttcccaggggaatatgcatgcagacggcctgtactggacggag
agtcagcttgaggccggtaataacctgaccatcatcagcggtcgggataccaatctgatt
ggtgcactggcgaaaggggattccgtcacaatggacgtgggtcgtgacctgacggtgcgt
tcattgcaggacaccgatgactacagctacgagcaatactcactgaatattgccggcagc
tacggcaccggtttcgacggcagtctgggcttcacgatggacaagatggacagcacgtgg
gccagcgtcaatgaacagagcgggatttacgccggcaagggcggctatgacattaccgtc
ggtaagcacacccagttagacggggcggtgattgcctcggaagcgacagctgacaaaaac
aatctggacaccggcacgttgggctggagcgatatcaagaacaaggcagattatgacgtc
agccatgtgtcgatgagtatcggctcgggcggtggcgcaccgtttgggttcccgggcgta
ccgggtacgcctatcgtggtggcctatggtgacagcgccagtagcacgacccatgcggcg
atagcggacggcacgttgaccattcgtgaccagagcaatcagcagcaagatattgcgaag
ctcagcaatgacacggctaacgcagccaatccgctggataagatttttgatgccgatgag
cagatgcgtaatctggaagcgataggtctggcggggcagatagtgtcgcaggtgacaacc
attgcgaccaatattggggtgaaggcggcgcaggatgaggcacatgctaaggcggatgct
cagaaagactcagcggcgaatgacccggccatcattgcacaggcgagagccgatttgtct
aaagcgggtaacgacaatccgacgcaggaagagctcaataaagccacctacgatgtggtg
tatcaggctgagtttaagattgccaatgaaaagcagatgaaggagtacggcacgggtagc
gatgtgcaacgggcaattcaggcggctggcgcagcgctgacggtagcgatgggcggtggt
agtgttgggaatgcggctgcggcggcttcagcaccttatctggctcagggcgtgaaagtg
ctgaccgaagggcctgaaatgaaggacaaggccattaacgcaattgcacatgcgattatc
ggtgccgcagtggctcaggggagtggtaatagcgcggcttccggagctattggtgccgcc
agcggtgaaatcattgcacagaccattacgcaatatctgtacgaaggtagaaagccggaa
gaactaacagaagagcagcgtcaggcggttgctgcgttgtcgatgatagcatcgggcgcg
attggtggtgtggtcggagatagtactgaatcggctgccacttctgctaatgcagggtat
aacgcggcggtgaataattttctgagtccggaaaaagctgaaacgctgattaaatcaata
gaagaccagaaggcgggtaaaaatttggtggaagcatcactgaatattgtgaagctgacg
aatgaagaccgtgctagtaatgttttactggaactgtatcaatcaggccaaccaatgaca
gaaagccagaaacaagagctggctggtttacttgaccaatatggttatgaacttcaggtt
atgtatggatttacgccacagaaagcgaatgaggctattcagggagtgcttgcaggtaaa
gcgtttgttgcgtcaacgggagatatcagtgcctataatgaagcattgagctatcttaaa
acggctagtgtacacaccagtcaagcgataatgggcactgatgcgttaatggcgttacct
ggcgcgccggggattgtagctcgctctgcattggcagcgggtggtgcttatcaggcaggt
tatggtttagggcagctttctgacgggaactatggcgaaggggcatggaatgttgggtta
ggaactgcagcgatttttggtggagtggcagggaatagtgtcatttcgagaactgataga
gctatagcttcgccggggaaagcagtatcgtggcaggagagtagtttgtttcctaatagt
aaagcggatacaagtccattatcgatacaagctcagaaagatttattagatgaaatcaat
aaattccgttctaggactcaagcaacaaatacatcaacaatgataggcgcatatgactca
gctacaggtaaaacagcgataggttttagtaacaataatattacagctgaattattagat
tcaaaaactgttacatatatagagtcacaactaggtgctaagattggtgagtttacaagt
ttttgtaagaatactgtgggcgcctgtgcagaagtatcagcagcggatcaattgattcgg
cagggggcagatccagcaagtattaaatttactcgagctgtaaggcctagagatgcttat
ggtaaaaaagaggttcccgctaaagctattgttgatacatgtgagaattgtgcggctacg
tggcctaatggaaataaaaaatga
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