Limnobaculum parvum: HYN51_04080
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Entry
HYN51_04080 CDS
T05491
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
KO
K15125
filamentous hemagglutinin
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lpv00536
]
HYN51_04080
Glycosaminoglycan binding proteins [BR:
lpv00536
]
Heparan sulfate / Heparin
Microbial pathogens
HYN51_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
ESPR
PT-VENN
EndoU_bacteria
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
AWH87811
UniProt:
A0A2Y9TW58
LinkDB
All DBs
Position
complement(2371423..2380029)
Genome browser
AA seq
2868 aa
AA seq
DB search
MNKNLYRVIFNQARGQLMVVPEIAGAHTAGGTPRASSGGRHPLSQLIAGLKPLTLLTSLA
LGLMTISLPAQADIVADHSAPGNQQPTVISSANGTPQVNIQTPSAAGVSRNTYSQFDVDN
RGAILNNSAAPVQTQLGGYVDGNPQVIRGGAKIILNEVNSRDPSQLNGYVEVAGQKAQVV
IANPSGITCDGCGFINANRATLTTGTPNLVNGQLEGYNVQQGNVTIQGRGMDSSQQSYTD
IIARSVRVNAGVWANELNVVTGKNKVSADTSQIEKQGGNEAGSPQFSVDVAVLGGMYANS
IRMVGTENGVGVHNAGHIGTQAGSVVVTTDGRIENSGTMSSAQDLTLSTPESLTNSGTLF
GKNTVQINAQGDIVNTAAGQMGTNGQLDVTTQGSLTTQGVMAADGNTTVSSRRGLNNGGT
VSAGQTLRVSGASIDNSGTLQGKGRTAISTPGYINQTASGKISSTGFLSLDSGDWMTSYG
SIYSADAASISVQNALFNGGTLDTGLGLTLSASHINNAGAMYGGSDVQAQSRSDLLNSGT
LGSDQNITLNAAGEFSSNNTIYAKGNARITAGNTVSNNGTLAADGLLSLTTPGALNNNGT
LYSKGNLTLSADQSVTSYGGIGADGELSLSTYGTLFNNQMLYGKGQTTLKTGGDVTNLGV
IGSDSRLSLTTPGNLLNTGTLYSGGPMTVTANGRITNGGTVNSGSDLTLTGQNSLYNGNT
IYAKGHANLNISGAVTNDGTIGADRNLMLKAGEDILNNGTLYSQGAGKYLTEGSFTNNRL
LRSEDTLSVEVGGSLLNDADIYAFAGLDFSAGQRMDNHAQIYSGGALNLHAIGDISNTSV
LAAFSDMTLSTTHFSNGSNALLASGVQSNGQRVNTGDITLVSAQPADLQGQILASGTFNV
DANGINLADGLVSAGAMNLQGHGGEINTDRAQLYVNNVFTAQTTGHWSNLGGQLYAGDMQ
LKAGSLTNDAAGIISAQSTNLTLNGLLSNRGLIDGLLTRLQASQIDNYGTGRIYGTWLGL
QADVINNREEGSTAATIAGRETLDMGAGTLNNYTHSLIFSGGNMSIGRLLDDNGNATGMG
GTLNNHSATIEALGDLRLSVGQVNNVNDHFSTEVREISRESRFEFSVVGDTTRYPKEMVT
YDYDELVRRIRIAGIPNRYFETHYEYVYDYIISESVITETDPAKILAGNNLLMTADTVNN
DKSQIVAGNVLSIEANTLNNVEVTGQRYIDEIGRVWKYTRHVKRQKEDTQDIDKNPYHPA
TVVQDITLHPSEILNHTQPDGSGRTSIDGRQEGIAPNSGINGINIERVNIQLPGENGMKD
VSVVTRPPSLNLILPNASLYKINPAVGSRYLIETDPQYTQLKRWLGSDYMTSRLQADPNN
MHKRLGDGYYEQRLISDQIINLTGQRFLNGYANDEEQYMALMNSGVEFAQKYPLSLGIAL
TPEQMANLTSDIVWLVSRDVTLPDGSIQTVLVPQVYAMIRPQDIDGSGALLAGKQVNLQL
TGDLVNQGRILAGDKLNVLAQNIQNMGGSISGNNVMLLANNDINNIGGLMQGFDSLRLQA
GHDINLITTTTQGEKAGRNGSSHTAINQVAALAVNHDNGTLQLSAGHDINLTAALLSNAG
QNSDTSIAAGHDLNLNTVTVAKQTEFYKDKNNYRRESTSSEVGSQMTGSGDITLSAKNDI
NARAAQVEAGGQLGVIAGNNLSITSGESTEDLSEHSKYSSRGSFGKKLTSESHDELHAVS
GVSSNFSGDSVVMKAGNDLLVHGSQVTGIHDVSLSAGNDLTIDTAAEKRDEMHLSRTTKS
GLMGTGGIGFTVGKIDEKSTNTTHGIGNLGSIVGSTEGNVTLSAGNHLAVKGSDVVAQQD
ISLTGKNVTVESVENQTHIQDKYERTQSGVTVALSGAVGGALNAAVTEAKQAQETHDSKI
KALQEIKAALSAVQAVQAGMMDLPKDSEGFVGISISGGAQRTESTTDTNIRAAQGSTIAA
GNNLSITATGNGEKGVDGDITLKGSAINAGNNMLLDANRDVNLLAAANTQKTDSENKSYG
GNAGVSFGIGGGKNGLRFFADANFSQGNMHADGLYWSESQLEAGNNLTIISGRDTNLIGA
LAKGDSVTMDVGRDLTVRSLQDTDDYSYEQYSLNIAGSYGTGFDGSLGFTMDKMDSTWAS
VNEQSGIYAGKGGYDITVGKHTQLDGAVIASEATPELNSLDTGTLGWSDIKNKADYDVSH
VSMSIGSGGGAPFGFPGVPGTPIVVAYGDSASSTTHAAIADGNITIRYQNNQQQDIAKLS
NDTANAANPLDKIFDADEQMRNLEAIGLAGQIVSQVTTIATNIGVMNAQDQARAEADANK
DAASKDPAIIAQARADLAKAGNENPTQEDLNKATYAVIYQASYDKFYEKEMEFYGTGSNV
GRAIQAAGAALTVAMGGGSAGNAAAAASAPLLAQGVKKLADTNFPIDEEHPNNANLFAKV
IGHAIVGLAVAEGSGNNGLSGALGAASGELIAKTIAEDLYHKKADDLTEAERQFIANMTS
IATGVAAGLVADNTADAGTAAAAAYNSAVNNYLSKGEPELLADMMKSCLSGGGSQASCQQ
QVQKEAIQRSNANLEELGQAMASNDAAKAEALFDGRANTEEYAYLKAMGVDPDLVNTLDG
TSAVAAEWIGTCMGMSWGECASAKGHEQIGSGLGWLGLGGAEKITVKPGEVGTKAGTSST
RGTTEPSYNWKAGEGEFSIKANGKVTDVDYHISKYDANSFLYDKPLPKIDYVDILSSETK
MHTLYGDKPGSGGHLFPGQPGKTFFPNNWPPERVVSNVGDIVTSPSTQWFAQSGAGGIYT
NAGKAARWVAWEVRDGVRVRVVYEPANGKIVTAFPDDKPIPPALKPIK
NT seq
8607 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatttataccgcgtaatttttaaccaagcgcgtggtcagttaatggtggta
ccggagattgccggtgcccacactgcggggggaacgcctcgcgcgtcgtctggcggcaga
catcccttaagccaactgattgccggtcttaaaccgctgacgctgttgaccagcctagcg
ttaggcctgatgaccattagcctgcccgctcaggcggatatcgtggcggaccacagcgcg
ccgggcaaccagcagcccacggttatcagcagcgcgaacggcacgccgcaggtcaatatt
cagactcccagcgccgcaggcgtatcgcgcaatacctacagccagttcgatgtggataac
cgtggcgctatcctcaataactcagccgcgccggtacaaacccaactgggcggctatgtt
gacggtaacccgcaggtgatacgcggcggggccaaaatcattcttaacgaagtcaattcc
cgcgacccaagtcagcttaacggttatgtggaagtggcggggcaaaaagcgcaggtggtc
atcgccaacccgtcaggcattacctgtgacggctgtggttttattaacgccaaccgcgcc
acgctgactaccggtacgccgaatctggtcaatggtcaactggagggctacaacgtccaa
cagggcaatgtgaccattcagggccgaggcatggacagcagccagcaaagctataccgat
attattgcccgctcagtgcgtgtgaatgcgggcgtctgggccaatgagcttaacgtcgtc
accggtaagaacaaggtcagtgccgataccagccagattgaaaaacagggcggcaatgag
gcgggcagccctcaattttccgtggatgtggcggtgctaggcggcatgtacgccaacagc
attcgcatggtgggtaccgaaaacggggtgggggttcacaacgcggggcatattggtacg
caggccgggtcggtggtggtgacaaccgacgggcggattgagaacagcggaacgatgagc
agcgcccaagacctgaccctctctacgccggaaagcctgaccaacagcggaacgctattt
ggtaaaaatacggttcagattaatgcgcagggggatatcgttaacaccgccgctgggcaa
atggggactaacggacagcttgacgtcaccacgcagggtagcctgaccacgcaaggcgtg
atggcggcggatggcaacaccacggtgagcagccgtcgcggcctgaataacggcggaact
gtctctgccggtcagacactccgggtctcgggcgccagcattgataacagcgggacgttg
cagggcaaagggcgcactgccatcagcacaccggggtacatcaaccagaccgccagcgga
aaaatcagcagcacgggctttttaagcctcgacagcggcgactggatgaccagctacggc
agtatttactcggcggacgcggcttcgatttcagttcaaaatgccctgtttaacggggga
actctggataccggattggggctgaccctgtcggccagccatatcaacaacgccggggcg
atgtatggcggtagcgatgttcaggcgcaaagccgcagtgacctgcttaacagtggtacc
ctcggctctgaccagaatatcaccctgaatgcagcgggtgagttctccagtaacaatacg
atttatgctaaaggcaatgcccggataacggcgggtaatacagtgagtaataacggtacg
ctggccgcggatgggttgctgagcctgactacgccgggcgcgctgaacaataacggcacg
ctgtacagtaaaggcaacctgaccttaagcgcggaccagtcggtgaccagctatggtggc
atcggtgctgacggcgaactgagtctgagcacctacggaacgctgtttaataaccaaatg
ctgtacggcaaaggccagactaccctgaaaaccggtggcgatgtcaccaacctcggggtg
ataggctcggatagccgattgtccctgaccaccccgggcaacctgctgaataccggcacc
ctgtacagcggtggcccgatgacggtcacggccaacggtcgcatcaccaacggcggcacc
gtcaacagcggcagtgatttaaccctgaccggccaaaattccctgtataacggcaacacg
atttacgccaaaggccatgcgaacctcaatattagcggcgcggtcaccaatgacggcacc
atcggcgctgaccgtaacctgatgctcaaggccggtgaggacatcctcaataacggcacg
ttgtacagtcagggcgcggggaaatacctcaccgagggcagctttaccaacaaccgcctg
ctgcgcagcgaagatacactgtcggtggaggtgggcggcagtctcctcaatgacgcggat
atctatgcttttgccgggcttgatttcagtgccggacagcgcatggataaccatgctcag
atatacagcggcggggcactgaacctgcacgccatcggggatatcagcaacacctcggtg
ctggcggcattcagcgatatgacgctgtcgaccacccactttagcaatggcagcaatgcg
ctgttggcctccggtgtacaaagcaacggtcaacgggtcaataccggtgatatcaccctt
gtcagcgcacagcctgcggatttacagggccagatcttggcctctggcacctttaacgtg
gatgcgaacggcatcaatctggctgacggactggtgagcgcgggcgcgatgaatttacag
gggcacgggggtgagataaacaccgaccgggctcaactttacgtgaacaatgtgttcacc
gcacaaaccaccggtcactggagcaaccttggcggtcagttgtacgccggtgatatgcag
ctcaaagcggggtcgttgaccaacgatgcggcggggattatcagcgcgcagtccaccaac
ctcaccctgaatggcctgttaagtaaccgggggctgattgacgggctattgacccgttta
caggccagtcaaatcgacaactacggcaccggtcgcatctacggaacctggctgggttta
caggcggatgttatcaacaaccgggaagaaggcagcacggccgccactatcgccggtcgt
gaaacgctggatatgggcgcaggaaccttaaacaactatacccattcgctgatattcagc
ggcggtaatatgtccatcggccgattgttggatgacaacggcaacgccaccggtatgggt
ggaacgttgaataaccacagtgcgaccatagaagcattaggggatttacggttgtcggtg
gggcaggtgaataacgttaatgaccactttagcaccgaagtacgtgaaatttcgcgcgaa
agccggtttgagttcagcgttgttggcgacaccacccgctacccaaaagaaatggtcacc
tatgattatgatgagttggtcaggcgtattcgaattgcgggtatccctaaccgatacttc
gaaacgcattatgagtatgtttatgactatatcatcagcgaaagcgttatcacggaaaca
gacccggccaaaattttagccggtaataatttgctgatgactgcggatacggtgaataac
gataaaagccagattgtcgcgggtaatgtcctgagtattgaggccaacaccttgaataat
gtggaggtcaccggtcagcgctacattgatgaaattggtcgcgtgtggaagtacacccga
catgtaaagcgtcagaaagaagatacacaggatatagacaaaaacccatatcatcctgcc
accgtggtgcaggacatcacgctacatccgtctgaaatcttgaatcacacccagcctgat
ggcagtggaagaacatcaattgatggtcgtcaggaaggcattgcccccaatagcggtatt
aacggtatcaatattgaacgggtaaacattcaactgccgggtgagaacggtatgaaggac
gtcagcgtggtaacccgtccaccgagcctgaatctgatattacccaatgccagtctgtat
aaaatcaatccggcggtaggtagtcgctatttaatcgaaaccgaccctcaatatacccaa
cttaagcgctggctgggttcggactatatgaccagccgcttacaggctgacccgaacaat
atgcataaacgtctgggggatggttactatgagcagcggctgattagcgaccagataatt
aacctaaccggacagcgctttttaaacggctacgccaatgacgaagagcaatatatggcg
ctgatgaacagcggcgtggagtttgctcagaagtatcctctgtcattaggtatcgcgctg
acgccagagcagatggctaacctgacttcagacatcgtctggctggtcagccgtgacgtg
accttaccggatggcagtatccaaacggttctggtgccgcaggtgtatgccatgattagg
ccgcaggatattgacggcagcggtgcgcttttggccggtaagcaggtcaatttgcaactg
accggtgatttggtcaatcaggggcgtattctggcgggggataagctgaatgtgctggcg
cagaatattcaaaatatgggcggtagcatcagcggcaataatgtgatgttgctggcgaat
aacgatattaataatatcggtgggttgatgcagggctttgacagcctgaggcttcaggcc
gggcatgatattaacctcatcaccaccaccacgcagggagaaaaggcgggtcgcaatggc
tcttcccatacggctatcaatcaggtggcagcccttgcggttaatcacgacaacggcaca
ttacagctttcggcgggtcacgatattaatctgacggcggcgctgctgagcaacgcgggt
cagaacagtgatacgagcattgcggcgggtcacgacctgaatctgaatacggtgacagta
gcgaaacagacggagttttataaagacaaaaacaactaccgtcgggaatcgacttcgtca
gaggtgggcagtcaaatgaccggcagcggcgatatcaccctgtcagcgaaaaatgacatc
aatgcccgagcagcgcaggtggaggccggtggtcaactcggggtcattgcgggaaataat
ctgtcgattaccagcggtgagtcaacggaagacctgagcgaacattcaaagtacagtagc
cggggaagttttggcaaaaaacttacgtcagaaagccatgatgagctgcatgctgtttcg
ggggtcagcagcaactttagcggtgactcagtggtgatgaaggccggaaacgacctgttg
gttcacggaagtcaggttactggaattcatgatgtttcgctcagtgccggaaatgacctg
actatcgataccgccgcggaaaaacgggatgagatgcatctgtcccgcaccaccaaatcg
ggcctgatgggcaccgggggtattggctttaccgttggcaaaatagatgaaaaatccacc
aacacgacgcacggtattggcaatcttggcagtattgtcggcagcaccgaaggcaacgtc
accttaagcgcgggcaatcatctcgcggtcaaaggctcagacgttgtcgcccagcaagac
atcagcctgacgggtaaaaacgtcaccgttgagtcagtggaaaaccagacccacattcag
gacaagtacgaacgtacccagtcgggcgtgaccgttgcgctgtctggtgcggtgggtggt
gcactgaatgcggcggtgaccgaagcgaaacaggcgcaggaaactcacgacagcaaaatc
aaggcgctacaggaaatcaaagcggcgctgtcggcggtgcaggccgtacaggccgggatg
atggacttgcccaaagacagcgaagggtttgtgggtatcagtatttcgggcggtgctcaa
cgtactgaatccaccactgacaccaatatacgggcggcgcagggttcaaccattgcggcg
gggaataatctgtcgattaccgccaccggtaacggtgagaaaggggtggatggcgatatc
acccttaaaggctccgccatcaatgcggggaataatatgctgcttgacgccaaccgggac
gttaacctgctggcggcggcgaacacccagaaaaccgacagtgagaacaagagctacggc
ggtaacgccggggtcagttttggtattggcgggggtaaaaacggcctgcgcttctttgcg
gatgcgaacttctcacaagggaatatgcatgcagacggcctgtactggagcgagagtcag
ctagaggccggtaataacctgaccatcatcagcggtcgggataccaatttgattggtgca
ctggcgaaaggggattccgtcacgatggacgtgggtcgtgacctgaccgttcgttcattg
caggacaccgatgactacagctacgagcaatactcactgaatattgccggcagctacggc
accggtttcgacggcagtctgggcttcacgatggacaagatggacagcacgtgggccagc
gtcaatgaacagagcgggatttacgccggtaagggcggttatgacattaccgtcggtaag
cacacccagttagacggggcggtgattgcgtcggaagcgacgccagagctgaacagtctg
gacaccggcacgttgggttggagcgatatcaagaacaaggcagattatgacgtcagccat
gtgtcgatgagtatcggctcgggcggtggtgccccgtttgggttcccaggcgtaccgggt
acgcctatcgtggtggcctatggtgacagcgccagtagcacgactcatgcggcgatagcg
gatggcaatatcactattcgctaccaaaacaatcaacagcaggatattgcgaagctcagc
aatgacacggctaacgcagccaatccgctggataagatttttgatgccgatgagcagatg
cgtaatctggaggcaattggtctggcggggcagatagtgtcgcaggtgacaaccattgcg
accaatattggggtgatgaacgcacaggatcaagcccgtgccgaagcagatgccaataag
gatgccgcttctaaagatccggctatcatcgcgcaggcgagagctgatttagctaaagcc
ggtaatgagaacccaacgcaggaagatttaaacaaagcgacctacgcggttatctatcag
gcttcttatgacaaattctacgaaaaggaaatggagttctacggcaccggcagcaatgtt
ggccgagcgatacaggcagccggtgcagcgctgacggtagcgatgggcggtggtagtgcg
gggaacgccgccgcggcggcttcggccccgttactggctcagggcgtgaagaaactggcg
gatacgaatttcccgatagacgaggaacatccgaacaatgcgaacctgttcgcgaaagtg
ataggtcatgcgattgttggtctggcggtagctgagggttcgggtaataatggcctgtct
ggtgcgttaggtgcggccagcggtgagctgatagcgaagacgatagcggaagatctgtat
cataagaaggctgatgacctgaccgaagccgaacgtcagtttattgccaatatgacctca
atcgccaccggcgtggcggcgggtttagtggctgataataccgcagatgcgggaacggct
gcggcggctgcgtataattctgcggtcaataactatctgagcaaaggtgaaccagaatta
ctggctgatatgatgaaatcctgtctgtccggtggcggtagtcaggcatcttgtcagcag
caggttcagaaagaggccattcagcggtctaatgccaatctggaagagttaggccaagcg
atggcttcaaatgatgctgctaaggctgaagcattatttgatggaagagccaacacagaa
gaatacgcttatctgaaagcgatgggggttgatccggatctggtaaatacactagatgga
accagtgctgttgcagcagaatggataggtacctgcatgggtatgagctggggcgagtgt
gccagtgccaaaggccatgagcagattggttctggtctgggttggctggggctgggtggt
gcagagaagataacggttaaaccgggtgaggtgggaaccaaagctggaacatcatcgaca
agaggaacgacagaaccttcttataactggaaagctggtgagggtgaatttagtataaaa
gcaaatgggaaagttactgatgttgactatcatattagtaaatatgatgctaattcgttc
ctttatgataaaccattacctaaaatagattatgttgatattctctcttcggaaaccaaa
atgcatacgctttatggcgataagccaggtagtggtgggcatttatttccaggacaacca
ggaaagacctttttccctaataactggccccctgaaagagttgttagtaatgtaggtgat
atagttacttcccctagcacccaatggtttgctcaatcgggagcagggggtatatatact
aatgctggtaaagcagcaagatgggttgcttgggaggttagggatggggtacgtgttcga
gtggtatatgagccagcgaatggtaaaatcgtaacggcattcccagatgataaaccaatt
ccacctgcgttaaagccaattaagtaa
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integrated database retrieval system
