Limnobaculum parvum: HYN51_04815
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Entry
HYN51_04815 CDS
T05491
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpv03021
]
HYN51_04815
Transcription machinery [BR:
lpv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYN51_04815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AWH87937
UniProt:
A0A2Y9TW46
LinkDB
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Position
complement(2561879..2562868)
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AA seq
329 aa
AA seq
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MSSNTLKVNEWPENADFDDSEPTEFDEKAQLDTVEEDSSTDDILLSQDVTQHVLDATQLY
LGEIGFSPLLTAQEEVYFARRALRGDAAARSRMIESNLRLVVKIARRYNNRGLALLDLIE
EGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRT
ARELSQKLDHEPRAEDIALQLDKSVSDVSRMLRLNERVTSVDSPLNGESDSALLDILPDE
NNNDPEFTTQDNDIKQSIVKWLFELNPKQREVLARRFGLLGYEAATLEDVGAEIGLTRER
VRQIQVEGLSQLREILVKQGLNIESLFQE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaatacgctgaaagtcaacgaatggcctgaaaatgccgatttcgatgatagt
gaacccacggagttcgacgaaaaagctcaactggataccgtcgaagaagatagctccacg
gatgacatactgctttcacaagatgtgactcaacatgtgctggatgcgacacagctatat
ctcggagaaattggtttttcacctttattaaccgcgcaggaagaagtctattttgcacgg
cgggcattacgtggcgatgccgcagcccgcagtcgcatgatagaaagtaacctgcgtttg
gttgtcaaaattgctcgtcgatataacaatcggggtcttgcactgcttgatcttatcgaa
gagggcaacttgggtcttattcgtgcggtagaaaagtttgatcctgaaagaggattccgt
ttctctacttatgccacttggtggattcgtcagacgatcgaacgtgccatcatgaatcag
accagaaccattcgcttaccgattcatatcgttaaagagctcaatgtctatttgcgtacc
gcccgtgagctttcccaaaagctggatcacgaaccgcgcgcggaagacattgcactccaa
ctggataaatcagtgagtgatgttagtcggatgctacggcttaacgaacgtgtgacgtct
gtggattctccgttaaatggtgaatcagatagtgcattgttggatatcttaccggatgag
aataacaatgatcctgaatttacgactcaggataatgatattaagcagagcatcgttaaa
tggttatttgagctgaatccaaagcagcgagaagtattagcccgtcgtttcggcctgtta
ggttatgaagcggcaaccctagaagatgttggcgcagagattgggttaacccgtgagcgc
gttcgtcaaattcaagtcgaagggctgagtcagttgcgtgagattctggtgaaacaaggg
ctgaatattgagtcgctgtttcaggaataa
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